4L81 Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_4L81_001 | 1/A/13:18 | GNRA | geometric HL_6N2V_003 HL_34789.2 | |
| HL_4L81_002 | 1/A/32:40 | No text annotation | geometric HL_2Y8W_001 HL_40612.1 | |
| HL_4L81_003 | 1/A/57:62 | GNRA | geometric HL_1G1X_001 NA | |
| HL_4L81_004 | 1/A/76:81 | GNRA | geometric HL_4OQU_004 HL_34789.2 |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_4L81_001 | 1/A/24:27, 1/A/46:48 | Major groove platform with extra pair | geometric IL_4OQU_001 IL_15698.5 | |
| IL_4L81_002 | 1/A/29:30, 1/A/42:44 | Major groove platform | geometric IL_4OQU_002 IL_48076.8 |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J4_4L81_001 | 1/A/5:10, 1/A/21:22, 1/A/50:53, 1/A/66:67 | SAM-I/IV riboswitch junction | homologous J4_4OQU_001 J4_28426.1 |
Problematic loops
No problematic loops
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