4P3U Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
No loops found
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_4P3U_001 | 1/A/5:7, 1/B/42:44 | Isolated non-canonical cWW pair IL_87907.2 | ||
| IL_4P3U_002 | 1/A/7:8, 1/B/40:42 | Single bulged A IL_31462.5 | ||
| IL_4P3U_005 | 1/A/17:19, 1/B/30:31 | Single bulged A IL_31462.5 | ||
| IL_4P3U_006 | 1/A/19:21, 1/B/28:30 | Isolated non-canonical cWW pair IL_28037.2 | ||
| IL_4P3U_007 | 1/C/5:7, 1/D/42:44 | Isolated non-canonical cWW pair IL_28037.2 | ||
| IL_4P3U_008 | 1/C/7:8, 1/D/40:42 | Single bulged A IL_31462.5 | ||
| IL_4P3U_011 | 1/C/17:19, 1/D/30:31 | Single bulged A IL_31462.5 | ||
| IL_4P3U_012 | 1/C/19:21, 1/D/28:30 | Isolated non-canonical cWW pair IL_87907.2 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_4P3U_003 | Isolated non-canonical cWW pair | ||
| IL_4P3U_004 | Isolated non-canonical cWW pair | ||
| IL_4P3U_009 | Isolated non-canonical cWW pair | ||
| IL_4P3U_010 | Isolated cWH basepair |
Valid loops
No loops found
Problematic loops
No problematic loops
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