4WCP Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_4WCP_001 | 1/A/5:7, 1/B/42:44 | Isolated non-canonical cWW pair | geometric IL_3TD0_006 NA | |
| IL_4WCP_002 | 1/A/7:9, 1/B/39:42 | Minor groove platform with extra cWW | geometric IL_4V88_411 NA | |
| IL_4WCP_003 | 1/A/16:19, 1/B/30:32 | Decoding loop with one bulged A | geometric IL_3LOA_003 IL_55553.2 | |
| IL_4WCP_004 | 1/A/19:21, 1/B/28:30 | Isolated non-canonical cWW pair | geometric IL_5WTI_002 IL_71625.4 | |
| IL_4WCP_005 | 1/C/5:7, 1/C/19:21 | Isolated non-canonical cWW pair | geometric IL_3BNR_007 IL_71625.4 | |
| IL_4WCP_006 | 1/C/7:9, 1/C/16:19 | Not an internal loop | geometric IL_5VCI_005 NA | |
| IL_4WCP_007 | 1/C/16:19, 1/C/7:9 | Not an internal loop | geometric IL_5VCI_005 NA | |
| IL_4WCP_008 | 1/C/19:21, 1/C/5:7 | Isolated non-canonical cWW pair | geometric IL_3BNR_007 IL_71625.4 |
Problematic loops
No problematic loops
Valid loops
No loops found
Problematic loops
No problematic loops
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