6FTG Summary
- Structure title
- Subtomogram average of OST-containing ribosome-translocon complexes from canine rough microsomal membranes
- Authors
- Release date
- 2018-03-21
- Experimental technique
- ELECTRON MICROSCOPY
- Resolution
- 9.1 Å
- Chains
- 3 RNA chains from Oryctolagus cuniculus
- 55 other chains
- Nucleic acid compounds
- Other compounds
- 28S ribosomal RNA, 5S ribosomal RNA, 5.8S ribosomal RNA
- Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1,RPN1, TMEM258, Oligosaccharyltransferase complex subunit OSTC, OST4, Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A, DAD1, OST48, RPN2, uL2, uL3, Ribosomal protein L4, 60S ribosomal protein L5, 60S ribosomal protein L6, uL30, eL8, uL6, Ribosomal protein L10 (Predicted), Ribosomal protein L11, eL13, Ribosomal protein L14, Ribosomal protein L15, uL13, uL22, uL14, eL19, eL20, eL21, eL22, uL14, Ribosomal protein L24, uL23, Ribosomal protein L26, 60S ribosomal protein L27, uL15, 60S ribosomal protein L29, eL30, eL31, eL32, eL33, eL34, eL29, 60S ribosomal protein L36, Ribosomal protein L37, eL38, eL39, eL40, 60s ribosomal protein l41, eL42, Ribosomal protein L37a, eL28, 60S acidic ribosomal protein P0, Ribosomal protein L12, Protein transport protein Sec61 subunit alpha isoform 1, Protein transport protein Sec61 subunit gamma, Protein transport protein Sec61 subunit beta
Pairwise Interactions
Interactions annotated by FR3D:- 1,436 base-pairs
- 4,036 base-stacking
- 69 base-phosphate
- 96 base-ribose
RNA 3D Motifs
In the current release of the RNA 3D Motif Atlas, 6FTG contains:- 83 hairpin loops from 0 motif groups
- 189 internal loops from 0 motif groups
- 47 junction loops from 0 motif groups
3D Redundancy
6FTG has chains which belong to the following equivalence classes in the current representative set:- NR_all_06650.39 (1)
- NR_all_10255.39 (1)
- NR_20.0_06650.39 (1)
- NR_20.0_10255.39 (1)
Similar structures
7O7Y 7O7Z 7OYD 8SCB 7ZJW 7O80 8P2K 8RJB 8B6C 8RJD 8B5L 9BDL 7UCK 8BPO 6SGC 7OBR 9F1B 7QWQ 7O81 7TOR 8RJC 7ZJX 7QWR 7TOQ 7NWI 8BHF 6R6P 6R5Q 9BDN 6P5I 6P5J 9F1D 6P5K 6ZVK 7UCJ 6P5N 7MDZ 6D9J 7NFX 7TM3 8BTK 6T59 8VFT 7A01 6MTD 5LZS 5LZV 7QWS 6MTE 6MTC 6D90 6GZ5 5LZZ 9F1C 6GZ3 5LZW 6MTB 6GZ4 9BDP 5LZT 7NWG 5LZX 6HCJ 6R6G 5LZU 7TUT 6FRK 6HCF 3JAH 6R7Q 6FTI 7NWH 3JAG 5LZY 3JAI 3J92 6FTJ 6HCQ 6HCM 4UJE 3JAN 3JAJ 4UJD 4D67 4D5Y 4UJCStructures from NR_all_06650.39