6GZ4 Summary
- Structure title
- tRNA translocation by the eukaryotic 80S ribosome and the impact of GTP hydrolysis, Translocation-intermediate-POST-2 (TI-POST-2)
- Authors
- Release date
- 2018-12-05
- Experimental technique
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
- Chains
- 7 RNA chains from Oryctolagus cuniculus
- 79 other chains
- Nucleic acid compounds
- Other compounds
- 28S ribosomal RNA, 5.8S ribosomal RNA, 5S ribosomal RNA, 18S ribosomal RNA, ap/P-site tRNA, pe/E-site-tRNA, mRNA
- ribosomal protein uL2, ribosomal protein uL3, ribosomal protein uL4, ribosomal protein uL18, ribosomal protein eL6, ribosomal protein uL30, ribosomal protein eL8, ribosomal protein uL6, ribosomal protein uL16, ribosomal protein uL5, ribosomal protein uL10, ribosomal protein eL13, ribosomal protein eL14, ribosomal protein eL15, ribosomal protein uL13, ribosomal protein uL22, ribosomal protein eL18, ribosomal protein eL19, ribosomal protein eL20, ribosomal protein eL21, ribosomal protein eL22, ribosomal protein uL14, ribosomal protein eL24, ribosomal protein uL23, ribosomal protein uL24, ribosomal protein eL27, ribosomal protein uL15, ribosomal protein eL29, ribosomal protein eL30, ribosomal protein eL31, ribosomal protein eL32, ribosomal protein eL33, ribosomal protein eL34, ribosomal protein uL29, ribosomal protein eL36, ribosomal protein eL37, ribosomal protein eL38, ribosomal protein eL39, ribosomal protein eL40, ribosomal protein eL41, ribosomal protein eL42, ribosomal protein eL43, ribosomal protein uL11, ribosomal protein eL28, ribosomal protein uL1, ribosomal protein uS2, ribosomal protein eS1, ribosomal protein eS28, ribosomal protein uS3, ribosomal protein eS4, ribosomal protein uS7, ribosomal protein eS6, ribosomal protein eS7, ribosomal protein eS8, ribosomal protein uS4, ribosomal protein eS10, ribosomal protein uS17, ribosomal protein eS12, ribosomal protein uS15, ribosomal protein uS11, ribosomal protein uS19, ribosomal protein uS9, ribosomal protein eS17, ribosomal protein uS13, ribosomal protein eS19, ribosomal protein uS10, ribosomal protein eS21, ribosomal protein uS8, ribosomal protein uS12, ribosomal protein eS24, ribosomal protein uS10, ribosomal protein eS26, ribosomal protein eS27, ribosomal protein eS28, ribosomal protein uS14, ribosomal protein eS30, ribosomal protein eS31, ribosomal protein RACK 1, eukaryotic elongation factor 2 (eEF2)
Pairwise Interactions
Interactions annotated by FR3D:- 1,854 base-pairs
- 5,440 base-stacking
- 198 base-phosphate
- 250 base-ribose
RNA 3D Motifs
In the current release of the RNA 3D Motif Atlas, 6GZ4 contains:- 126 hairpin loops from 0 motif groups
- 294 internal loops from 0 motif groups
- 78 junction loops from 0 motif groups
3D Redundancy
6GZ4 has chains which belong to the following equivalence classes in the current representative set:- NR_all_01147.1 (1) rep
- NR_all_06650.45 (1)
- NR_all_10255.45 (1)
- NR_all_68467.16 (1)
- NR_all_21280.44 (1)
- NR_4.0_01147.1 (1) rep
- NR_4.0_06650.45 (1)
- NR_4.0_10255.45 (1)
- NR_4.0_68467.16 (1)
- NR_4.0_21280.44 (1)
- NR_20.0_01147.1 (1) rep
- NR_20.0_06650.45 (1)
- NR_20.0_10255.45 (1)
- NR_20.0_68467.16 (1)
- NR_20.0_21280.44 (1)
Similar structures
8SCB 7O7Z 8RJB 8RJD 8RJC 8B6C 8B5L 9YQ0 9YQ1 8VVQ 9BDL 8BPO 9YPO 9YPS 9QQA 9YPV 8P2K 7UCK 9YPT 7NWI 7TOR 8VVP 9BDN 7ZJX 9F1B 9MR4 7TM3 6P5I 9NDP 8BHF 7OBR 7O81 6P5K 7UCJ 6MTD 7TOQ 6MTE 6P5N 6MTC 6R5Q 9F1D 7MDZ 8VVT 5LZV 5LZS 6MTB 9QQB 5LZZ 6P5J 7A01 6R6P 8VVR 8VVS 7NWG 7QWQ 8VFT 6ZVK 6D90 7NFX 7QWR 5LZW 7TUT 5LZT 6HCF 9F1C 7NWH 9BDP 8VVV 6D9J 6GZ5 5LZU 6GZ3 6FRK 3JAH 6R6G 5LZY 3JAG 6HCJ 6R7Q 3JAI 8VVU 5LZX 3J92 6FTI 6FTJ 6HCQ 6HCM 7QWS 6T59 4UJE 6FTG 4D67 4D5Y 4UJC 4UJD 3JAJ 3JAN 7O7Y 7ZJW 7O80 6SGC 8BTK 7OYDStructures from NR_all_06650.45