7OBR Summary
- Structure title
- RNC-SRP early complex
- Authors
- Jomaa, A., Ban, N.
- Release date
- 2021-07-21
- Experimental technique
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
- Chains
- 4 RNA chains from Canis lupus familiaris, Oryctolagus cuniculus
- 49 other chains
- Nucleic acid compounds
- Other compounds
- SRP RNA, 28S rRNA, 5S ribosomal RNA, 5.8S ribosomal RNA
- 60S ribosomal protein L8, uL3, 60S ribosomal protein L4, 60S ribosomal protein L5, 60S ribosomal protein L6, uL30, 60S ribosomal protein L7a, 60S ribosomal protein L9, 60S ribosomal protein L10, Ribosomal protein L11, 60S ribosomal protein L13, 60S ribosomal protein L14, Ribosomal protein L15, 60S ribosomal protein L13a, uL22, eL18, 60S RIBOSOMAL PROTEIN EL19, 60S ribosomal protein L18a, eL21, Ribosomal protein L22, Ribosomal protein L23, Ribosomal protein L24, uL23, Ribosomal protein L26, 60S ribosomal protein L27, uL15, 60S ribosomal protein L29, 60S ribosomal protein L30, eL31, eL32, eL33, 60S ribosomal protein L34, uL29, 60S ribosomal protein L36, Ribosomal protein L37, eL38, eL39, 60S RIBOSOMAL PROTEIN EL40, 60s ribosomal protein l41, eL42, eL43, Signal recognition particle 19, eL28, Dipeptidyl aminopeptidase B, Signal recognition particle 14 kDa protein, Signal recognition particle subunit SRP68, Signal recognition particle 9 kDa protein, Signal recognition particle 54 kDa protein, Signal recognition particle subunit SRP72
Pairwise Interactions
Interactions annotated by FR3D:- 1,439 base-pairs
- 3,931 base-stacking
- 54 base-phosphate
- 76 base-ribose
RNA 3D Motifs
In the current release of the RNA 3D Motif Atlas, 7OBR contains:- 85 hairpin loops from 0 motif groups
- 204 internal loops from 0 motif groups
- 49 junction loops from 0 motif groups
3D Redundancy
7OBR has chains which belong to the following equivalence classes in the current representative set:- NR_all_34771.3 (1)
- NR_all_06650.42 (1)
- NR_all_10255.42 (1)
- NR_4.0_34771.3 (1)
- NR_4.0_06650.42 (1)
- NR_4.0_10255.42 (1)
- NR_3.5_34771.3 (1) rep
- NR_3.5_06650.42 (1)
- NR_3.5_10255.42 (1)
- NR_3.0_34771.3 (1) rep
- NR_3.0_06650.42 (1)
- NR_3.0_10255.42 (1)
- NR_20.0_34771.3 (1)
- NR_20.0_06650.42 (1)
- NR_20.0_10255.42 (1)