7QTT Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_7QTT_002 | 1/d/64:70 | GNRA variation | homologous HL_5VSU_001 HL_34789.1 | |
| HL_7QTT_003 | 1/e/37:45 | No text annotation |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_7QTT_001 | No text annotation | ||
| HL_7QTT_004 | No text annotation | ||
| HL_7QTT_005 | No text annotation | ||
| HL_7QTT_006 | No text annotation |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_7QTT_016 | 1/d/33:42, 1/g/5:13 | No text annotation | ||
| IL_7QTT_002 | 1/d/52:53, 1/f/22:25 | Multiple bulged bases | geometric IL_1KXK_003 NA | |
| IL_7QTT_003 | 1/d/58:61, 1/d/75:77 | Isolated non-canonical cWW pair | geometric IL_3TD0_002 NA | |
| IL_7QTT_004 | 1/d/61:62, 1/d/72:75 | No text annotation | geometric IL_8VTW_097 NA | |
| IL_7QTT_005 | 1/d/88:90, 1/f/8:10 | Isolated non-canonical cWW pair | geometric IL_3GM7_004 IL_01003.1 | |
| IL_7QTT_007 | 1/e/18:23, 1/e/57:59 | No text annotation | ||
| IL_7QTT_008 | 1/e/24:28, 1/e/54:56 | No text annotation | ||
| IL_7QTT_009 | 1/e/35:37, 1/e/45:47 | No text annotation | ||
| IL_7QTT_012 | 1/f/31:33, 1/g/145:147 | No text annotation | ||
| IL_7QTT_017 | 1/f/31:35, 1/g/142:147 | No text annotation | ||
| IL_7QTT_013 | 1/f/33:35, 1/g/142:145 | No text annotation | ||
| IL_7QTT_015 | 1/f/39:41, 1/g/135:138 | No text annotation |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_7QTT_001 | Single bulged C | ||
| IL_7QTT_006 | Isolated non-canonical cWW pair | ||
| IL_7QTT_010 | No text annotation | ||
| IL_7QTT_011 | No text annotation | ||
| IL_7QTT_014 | No text annotation |
Valid loops
No loops found
Problematic loops
No problematic loops
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