7UO2 Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_7UO2_002 | 1/B/96:102 | GNRA | homologous HL_1U9S_001 HL_07380.1 | |
| HL_7UO2_006 | 1/B/313:318 | No text annotation | geometric HL_9E6Q_061 HL_34789.6 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_7UO2_001 | No text annotation | ||
| HL_7UO2_003 | No text annotation | ||
| HL_7UO2_004 | No text annotation | ||
| HL_7UO2_005 | No text annotation |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_7UO2_001 | 1/B/21:23, 1/B/58:60 | Isolated non-canonical cWW pair | geometric IL_8CRE_456 IL_01003.6 | |
| IL_7UO2_002 | 1/B/27:29, 1/B/51:54 | No text annotation | geometric IL_8GLP_084 IL_84227.1 | |
| IL_7UO2_004 | 1/B/68:70, 1/B/357:358 | No text annotation | ||
| IL_7UO2_005 | 1/B/78:87, 1/B/242:243 | No text annotation | ||
| IL_7UO2_010 | 1/B/253:261, 1/B/289:296 | No text annotation |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_7UO2_003 | Single bulged G | ||
| IL_7UO2_006 | No text annotation | ||
| IL_7UO2_007 | No text annotation | ||
| IL_7UO2_008 | No text annotation | ||
| IL_7UO2_009 | No text annotation |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J3_7UO2_001 | 1/B/10:20, 1/B/61:67, 1/B/359:364 | No text annotation | ||
| J4_7UO2_001 | 1/B/74:75, 1/B/246:250, 1/B/299:306, 1/B/325:353 | No text annotation | ||
| J4_7UO2_002 | 1/B/91:92, 1/B/106:107, 1/B/119:120, 1/B/237:238 | RNase P junction | homologous J4_1U9S_001 J4_86610.2 |
Problematic loops
No problematic loops
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