RNA 3D Hub //

8I0R Hairpin, Internal, and multi-helix Junction Loop Motifs

Download loops

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
HL_8I0R_0011/B/37:45No text annotation
HL_8I0R_0041/F/64:70GNRA
homologous
HL_6ASO_001
HL_34789.6
HL_8I0R_0051/H/52:61No text annotation

Problematic loops

#loop idProblemSequence
HL_8I0R_002No text annotation
HL_8I0R_003No text annotation
HL_8I0R_006No text annotation
HL_8I0R_007No text annotation
HL_8I0R_008No text annotation

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
IL_8I0R_0021/B/19:24,
1/B/56:58		No text annotation
IL_8I0R_0031/B/24:28,
1/B/54:56		No text annotation
IL_8I0R_0041/B/35:37,
1/B/45:47		No text annotation
IL_8I0R_0061/F/33:38,
1/G/9:13		No text annotation
IL_8I0R_0171/F/38:42,
1/G/5:9		Triple non-canonical cWW pairs
geometric
IL_4LFB_065
IL_71154.5
IL_8I0R_0181/F/52:53,
1/H/22:25		Multiple bulged bases
geometric
IL_1KXK_003
NA
IL_8I0R_0071/F/58:61,
1/F/75:77		Other IL
geometric
IL_5M0H_001
NA
IL_8I0R_0081/F/61:62,
1/F/72:75		Multiple bulged bases
geometric
IL_7RQB_098
NA
IL_8I0R_0091/G/85:91,
1/H/39:44		No text annotation
IL_8I0R_0101/G/95:98,
1/H/33:35		Isolated non-canonical cWW pair
geometric
IL_3GM7_004
IL_01003.6

Problematic loops

#loop idProblemSequence
IL_8I0R_001No text annotation
IL_8I0R_005Single bulged C
IL_8I0R_022No text annotation
IL_8I0R_019No text annotation
IL_8I0R_020Isolated non-canonical cWW pair
IL_8I0R_021Isolated non-canonical cWW pair
IL_8I0R_011No text annotation
IL_8I0R_012No text annotation
IL_8I0R_013No text annotation
IL_8I0R_014No text annotation
IL_8I0R_015No text annotation
IL_8I0R_023No text annotation
IL_8I0R_016No text annotation

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
J3_8I0R_0011/F/55:57,
1/F/78:84,
1/H/15:20		No text annotation

Problematic loops

No problematic loops


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