8OIS Summary
- Structure title
- 28S human mitochondrial small ribosomal subunit with mtRF1 and P-site tRNA
- Authors
- Saurer, M., Leibundgut, M., Scaiola, A., Schoenhut, T., Ban, N.
- Release date
- 2023-06-14
- Experimental technique
- ELECTRON MICROSCOPY
- Resolution
- 3.0 Å
- Chains
- 3 RNA chains from Homo sapiens
- 33 other chains
- Nucleic acid compounds
- Other compounds
- 12S rRNA, P-site Met-tRNA(Met), mRNA
- 28S ribosomal protein S35, mitochondrial, 28S ribosomal protein S24, mitochondrial, Aurora kinase A-interacting protein, 28S ribosomal protein S6, mitochondrial, 28S ribosomal protein S7, mitochondrial, 28S ribosomal protein S10, mitochondrial, 28S ribosomal protein S12, mitochondrial, 28S ribosomal protein S14, mitochondrial, 28S ribosomal protein S15, mitochondrial, 28S ribosomal protein S16, mitochondrial, 28S ribosomal protein S17, mitochondrial, 28S ribosomal protein S18b, mitochondrial, 28S ribosomal protein S18c, mitochondrial, 28S ribosomal protein S21, mitochondrial, 28S ribosomal protein S22, mitochondrial, 28S ribosomal protein S23, mitochondrial, 28S ribosomal protein S25, mitochondrial, 28S ribosomal protein S26, mitochondrial, 28S ribosomal protein S27, mitochondrial, 28S ribosomal protein S28, mitochondrial, 28S ribosomal protein S29, mitochondrial, 28S ribosomal protein S31, mitochondrial, 28S ribosomal protein S33, mitochondrial, Peptide chain release factor 1, mitochondrial,mtRF1(AAQ), 28S ribosomal protein S2, mitochondrial, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, 28S ribosomal protein S5, mitochondrial, Pentatricopeptide repeat domain-containing protein 3, mitochondrial, 28S ribosomal protein S9, mitochondrial, 28S ribosomal protein S11, mitochondrial, 28S ribosomal protein S34, mitochondrial, 39S ribosomal protein L19, mitochondrial, 39S ribosomal protein L55, mitochondrial
Pairwise Interactions
Interactions annotated by FR3D:- 367 base-pairs
- 1,006 base-stacking
- 49 base-phosphate
- 42 base-ribose
RNA 3D Motifs
In the current release of the RNA 3D Motif Atlas, 8OIS contains:- 24 hairpin loops from 0 motif groups
- 53 internal loops from 0 motif groups
- 14 junction loops from 0 motif groups
3D Redundancy
8OIS has chains which belong to the following equivalence classes in the current representative set:- NR_all_93855.22 (1)
- NR_all_41135.1 (1)
- NR_4.0_93855.22 (1)
- NR_4.0_41135.1 (1)
- NR_3.5_93855.22 (1)
- NR_3.5_41135.1 (1)
- NR_3.0_93855.22 (1)
- NR_3.0_41135.1 (1)
- NR_20.0_93855.22 (1)
- NR_20.0_41135.1 (1)
Similar structures
7QI4 7P2E 7QI5 8RRI 9OLF 8ANY 7PNX 7PO1 7PO3 7QI6 6RW5 7PO2 8K2A 7PNY 7PNZ 9UWH 9PGL 8CSS 9PGF 9G5C 9HFM 9G5D 8XT0 8QRN 9HFO 8CSR 9PSM 9PGI 9PG8 9PS7 8XT2 8CSQ 9PGM 8OIR 9PSI 9PRX 8CST 9G5E 8CSP 9HFN 9PRQ 9G5B 6ZSD 7A5I 9PRD 7L08 6ZSC 6VMI 6ZSG 6ZSA 8QRM 6VLZ 8QRL 3J9M 8CSU 7OG4 7A5G 7A5F 9PS0 6ZSB 6ZS9 6NU2 6ZSE 6NU3 8QRK 6ZM6 6RW4 7PO0 6ZM5 7A5KStructures from NR_all_93855.22