8SP9 Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_8SP9_001 | 1/C/13:22 | tRNA D-loop HL_20490.1 | ||
| HL_8SP9_002 | 1/C/67:71 | Mini UNCG HL_12626.2 | ||
| HL_8SP9_003 | 1/C/90:95 | UNCG HL_61337.2 | ||
| HL_8SP9_004 | 1/C/130:138 | T-loop with 2 stacked bulged bases HL_33597.2 |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_8SP9_001 | 1/C/76:79, 1/C/106:107 | Multiple bulged bases IL_71421.2 | ||
| IL_8SP9_002 | 1/C/82:86, 1/C/99:103 | Triple non-canonical cWW pairs IL_71154.2 |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J4_8SP9_001 | 1/C/7:10, 1/C/25:27, 1/C/120:126, 1/C/142:143 | Virus junction J4_95067.1 | ||
| J4_8SP9_002 | 1/C/38:39, 1/C/63:64, 1/C/74:75, 1/C/108:109 | No text annotation J4_86610.1 |
Problematic loops
No problematic loops
Coloring options: