9DPB Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_9DPB_001 | 1/C/13:22 | tRNA D-loop | homologous HL_7MRL_001 HL_20490.1 | |
| HL_9DPB_002 | 1/C/31:39 | tRNA anticodon loop with synthetase | homologous HL_3KFU_005 HL_69186.2 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_9DPB_003 | T-loop with 2 stacked bulged bases |
Valid loops
No loops found
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J4_9DPB_001 | 1/C/7:10, 1/C/25:27, 1/C/43:49, 1/C/65:66 | tRNA junction | homologous J4_7MRL_001 J4_95067.1 |
Problematic loops
No problematic loops
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