RNA 3D Hub //

9HM0 Summary

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Circular interaction diagram PDF
Structure title
Translational activator Aep3 in complex with mRNA and the yeast mitochondrial ribosome
Authors
Carlstrom, A., Rovsnik, U., Ott, M.
Release date
2025-12-17
Experimental technique
ELECTRON MICROSCOPY
Resolution
3.0 Å
Chains
3 RNA chains from Saccharomyces cerevisiae W303
74 other chains
Nucleic acid compounds
21S mitochondrial rRNA, 15S mitochondrial rRNA, E/E-site formyl-methionine tRNA
Other compounds
Large ribosomal subunit protein bL36m, Small ribosomal subunit protein mS38, Large ribosomal subunit protein mL38, Small ribosomal subunit protein mS41, Large ribosomal subunit protein mL40, Small ribosomal subunit protein mS42, Large ribosomal subunit protein mL41, Small ribosomal subunit protein mS43, Large ribosomal subunit protein mL43, Small ribosomal subunit protein mS27, Large ribosomal subunit protein mL44, Small ribosomal subunit protein mS45, Large ribosomal subunit protein mL46, Small ribosomal subunit protein mS46, Large ribosomal subunit protein mL49, Small ribosomal subunit protein mS47, Large ribosomal subunit protein mL50, Large ribosomal subunit protein mL57, Small ribosomal subunit protein bS1m, Small ribosomal subunit protein uS2m, Large ribosomal subunit protein uL2m, Small ribosomal subunit protein uS3m, Large ribosomal subunit protein uL3m, Small ribosomal subunit protein uS4m, Large ribosomal subunit protein uL4m, Small ribosomal subunit protein uS5m, Large ribosomal subunit protein uL5m, Small ribosomal subunit protein bS6m, Large ribosomal subunit protein uL6m, Small ribosomal subunit protein uS7m, Large ribosomal subunit protein bL9m, Small ribosomal subunit protein uS8m, Large ribosomal subunit protein uL13m, Small ribosomal subunit protein uS9m, Large ribosomal subunit protein uL14m, Small ribosomal subunit protein uS10m, Large ribosomal subunit protein uL15m, Small ribosomal subunit protein uS11m, Large ribosomal subunit protein uL16m, Small ribosomal subunit protein uS12m, Large ribosomal subunit protein bL17m, Small ribosomal subunit protein uS13m, Large ribosomal subunit protein bL19m, Small ribosomal subunit protein uS14m, Large ribosomal subunit protein bL21m, Small ribosomal subunit protein uS15m, Large ribosomal subunit protein uL22m, Small ribosomal subunit protein bS16m, Large ribosomal subunit protein uL23m, Small ribosomal subunit protein uS17m, Large ribosomal subunit protein uL24m, Small ribosomal subunit protein bS18m, Large ribosomal subunit protein bL27m, Small ribosomal subunit protein uS19m, Large ribosomal subunit protein bL28m, Small ribosomal subunit protein bS21m, Large ribosomal subunit protein uL29m, Small ribosomal subunit protein mS23, Large ribosomal subunit protein uL30m, Small ribosomal subunit protein mS26, Large ribosomal subunit protein bL31m, Small ribosomal subunit protein mS29, Large ribosomal subunit protein bL32m, Small ribosomal subunit protein mS33, Large ribosomal subunit protein bL33m, Small ribosomal subunit protein mS35, Large ribosomal subunit protein bL34m, Small ribosomal subunit protein mS37, Large ribosomal subunit protein bL35m, ATPase expression protein 3, Large ribosomal subunit protein mL58, Large ribosomal subunit protein mL59, Large ribosomal subunit protein mL60, Large ribosomal subunit protein mL67

Pairwise Interactions

Interactions annotated by FR3D: View all

RNA 3D Motifs

In the current release of the RNA 3D Motif Atlas, 9HM0 contains:
  • 75 hairpin loops from 0 motif groups
  • 154 internal loops from 0 motif groups
  • 50 junction loops from 0 motif groups
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3D Redundancy

9HM0 has chains which belong to the following equivalence classes in the current representative set:

Similar structures

3J6B 9HLZ 8UXA 5MRE 5MRC 5MRF
Structures from NR_all_08470.5
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