- Structure title
- Structure of the HCV IRES-dependent pre-48S translation initiation complex with eIF1A, eIF5B, and eIF3
- Authors
- Iwasaki, W., Kashiwagi, K., Sakamoto, A., Nishimoto, M., Takahashi, M., Machida, K., Imataka, H., Matsumoto, A., Shichino, Y., Iwasaki, S., Imami, K., Ito, T.
- Release date
- 2025-12-03
- Experimental technique
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
- Chains
-
3 RNA chains from
Homo sapiens, Hepacivirus hominis
-
45 other chains
- Nucleic acid compounds
18S ribosomal RNA, Initiator Met-tRNA-i, HCV-IRES RNA
- Other compounds
Eukaryotic translation initiation factor 1A, X-chromosomal, Eukaryotic translation initiation factor 3 subunit A, Eukaryotic translation initiation factor 3 subunit C, Eukaryotic translation initiation factor 3 subunit D, Eukaryotic translation initiation factor 3 subunit E, Eukaryotic translation initiation factor 3 subunit F, Eukaryotic translation initiation factor 3 subunit H, Eukaryotic translation initiation factor 3 subunit K, Eukaryotic translation initiation factor 3 subunit L, Eukaryotic translation initiation factor 3 subunit M, Eukaryotic translation initiation factor 5B, 60S ribosomal protein L41, Small ribosomal subunit protein uS2, 40S ribosomal protein S3a, 40S ribosomal protein S2, 40S ribosomal protein S3, 40S ribosomal protein S4, X isoform, 40S ribosomal protein S5, 40S ribosomal protein S6, 40S ribosomal protein S7, 40S ribosomal protein S8, 40S ribosomal protein S9, 40S ribosomal protein S10, 40S ribosomal protein S11, 40S ribosomal protein S13, 40S ribosomal protein S14, 40S ribosomal protein S15, 40S ribosomal protein S16, 40S ribosomal protein S17, 40S ribosomal protein S18, 40S ribosomal protein S19, 40S ribosomal protein S20, 40S ribosomal protein S21, 40S ribosomal protein S15a, 40S ribosomal protein S23, 40S ribosomal protein S24, 40S ribosomal protein S25, 40S ribosomal protein S26, 40S ribosomal protein S27, 40S ribosomal protein S28, 40S ribosomal protein S29, 40S ribosomal protein S30, 40S ribosomal protein S12, Receptor of activated protein C kinase 1, Ubiquitin-40S ribosomal protein S27a
Pairwise Interactions
Interactions annotated by
FR3D:
View all
RNA 3D Motifs
In the current release of the
RNA 3D Motif Atlas, 9KN6 contains:
-
44 hairpin loops from 0 motif groups
-
111 internal loops from 0 motif groups
-
26 junction loops from 0 motif groups
More
3D Redundancy
9KN6 has chains which belong to the following equivalence classes in the current representative set:
Similar structures
None found
