9QQB Summary
- Structure title
- Quaternary complex of a translating ribosome, NAC, NMT1, and NatA
- Authors
- Echeverria, B., Jaskolowski, M., Scaiola, A., Ban, N.
- Release date
- 2025-07-16
- Experimental technique
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
- Chains
- 5 RNA chains from Oryctolagus cuniculus
- 84 other chains
- Nucleic acid compounds
- Other compounds
- 18S rRNA, P site Phe tRNA, 28S rRNA, 5S rRNA, 5.8S rRNA
- Small ribosomal subunit protein eS27, Small ribosomal subunit protein eS28, Ubiquitin-ribosomal protein eS31 fusion protein, Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein, eS26, Small ribosomal subunit protein RACK1, Small ribosomal subunit protein uS14, Small ribosomal subunit protein uS2, 40S ribosomal protein S3a, 40S ribosomal protein S2, 40S ribosomal protein S3, 40S ribosomal protein S4, Small ribosomal subunit protein uS7, 40S ribosomal protein S6, 40S ribosomal protein S7, 40S ribosomal protein S8, Small ribosomal subunit protein uS4, S10_plectin domain-containing protein, Small ribosomal subunit protein uS17, Small ribosomal subunit protein eS12, Small ribosomal subunit protein uS15, Small ribosomal subunit protein uS11, Small ribosomal subunit protein uS19, Small ribosomal subunit protein uS9, Small ribosomal subunit protein eS17, Small ribosomal subunit protein uS13, 40S ribosomal protein S19, Small ribosomal subunit protein uS10, Small ribosomal subunit protein eS21, Small ribosomal subunit protein uS8, 40S ribosomal protein S23, 40S ribosomal protein S24, Small ribosomal subunit protein eS25, Small ribosomal subunit protein eS32, Large ribosomal subunit protein uL2, Ribosomal protein L3, Large ribosomal subunit protein uL4, Large ribosomal subunit protein uL18, 60S ribosomal protein L6, Ribosomal Protein uL30, 60S ribosomal protein L7a, 60S ribosomal protein L9, 60S ribosomal protein L10, 60S ribosomal protein L11, Nascent chain, Large ribosomal subunit protein eL13, 60S ribosomal protein L14, Ribosomal protein L15, Large ribosomal subunit protein uL13, Large ribosomal subunit protein uL22, eL18, Ribosomal protein L19, Large ribosomal subunit protein eL20, 60S ribosomal protein L21, 60S ribosomal protein L22, Ribosomal protein L23, Ribosomal protein L24, Large ribosomal subunit protein uL23, Ribosomal protein L26, 60S ribosomal protein L27, 60S ribosomal protein L27a, 60S ribosomal protein L29, 60S ribosomal protein L30, 60S ribosomal protein L31, Ribosomal protein L32, 60S ribosomal protein L35a, 60S ribosomal protein L34, 60S ribosomal protein L35, 60S ribosomal protein L36, Ribosomal protein L37, 60S ribosomal protein L38, 60S ribosomal protein L39-like, Ubiquitin-ribosomal protein eL40 fusion protein, Large ribosomal subunit protein eL42, 60S ribosomal protein L37a, [histone H4]-N-methyl-L-lysine20 N-methyltransferase KMT5B, Large ribosomal subunit protein uL10, 60S ribosomal protein L12, Ribosomal protein uL1, Glycylpeptide N-tetradecanoyltransferase 1, Nascent polypeptide-associated complex subunit alpha, Isoform 2 of Transcription factor BTF3, N-alpha-acetyltransferase 15, NatA auxiliary subunit, N-alpha-acetyltransferase 10
Pairwise Interactions
Interactions annotated by FR3D:- 2,074 base-pairs
- 5,945 base-stacking
- 89 base-phosphate
- 103 base-ribose
RNA 3D Motifs
In the current release of the RNA 3D Motif Atlas, 9QQB contains:- 114 hairpin loops from 0 motif groups
- 275 internal loops from 0 motif groups
- 70 junction loops from 0 motif groups
3D Redundancy
9QQB has chains which belong to the following equivalence classes in the current representative set:- NR_all_06650.40 (1)
- NR_all_10255.40 (1)
- NR_all_68467.15 (1)
- NR_all_21280.38 (1)
- NR_4.0_06650.40 (1)
- NR_4.0_10255.40 (1)
- NR_4.0_68467.15 (1)
- NR_4.0_21280.38 (1)
- NR_3.5_06650.40 (1)
- NR_3.5_10255.40 (1)
- NR_3.5_68467.15 (1)
- NR_3.5_21280.38 (1)
- NR_20.0_06650.40 (1)
- NR_20.0_10255.40 (1)
- NR_20.0_68467.15 (1)
- NR_20.0_21280.38 (1)
Similar structures
4KZY 4KZZ 4KZX 7O7Y 7O7Z 7OYD 8SCB 7ZJW 9QQA 7O80 8P2K 7JQB 7UCK 9BDL 9F1B 6SGC 7TOR 8P03 7O81 7ZJX 9C8K 7NWI 7UCJ 6YAL 8BHF 9F1D 6R5Q 9BDN 7TOQ 6ZVK 6P5I 6P5K 6P5J 6P4G 7MDZ 6R6P 6P4H 6P5N 6D9J 8VFT 7JQC 8BTK 6W2T 8P09 7A01 5LZS 6MTD 5LZV 6D90 6MTC 6MTE 7SYS 6YAN 6W2S 6GZ5 7SYR 5LZZ 9F1C 5LZW 6GZ3 7SYX 7SYW 6MTB 7NWG 9BDP 6GZ4 5LZT 6YAM 5LZX 6HCJ 7SYQ 6R6G 5LZU 6HCF 7SYV 6R7Q 3JAH 7SYN 7SYP 7NWH 5FLX 5LZY 3JAG 3JAI 7SYG 7SYK 7SYT 7SYI 7SYL 7SYU 7SYH 7SYO 7SYM 7SYJ 5K0Y 6HCQ 9CPA 6HCM 4UJE 3JAN 3JAJ 4UJD 4D61 4D5L 4UJCStructures from NR_all_21280.38