9RU9 Summary
- Structure title
- RPS26dC HEK mutant 80S ribosome bound to Kozak mRNA (RPS26dC-Kozak)
- Authors
- Hiregange, D.G., Fraticelli, D., Bashan, A., Yonath, A., Dikstein, R.
- Release date
- 2026-06-03
- Experimental technique
- ELECTRON MICROSCOPY
- Resolution
- 3.0 Å
- Chains
- 7 RNA chains from Homo sapiens
- 75 other chains
- Nucleic acid compounds
- Other compounds
- E site tRNA, 23S rRNA, 5S rRNA, 5.8S rRNA, P site tRNA, 18S rRNA, Kozak mRNA
- Large ribosomal subunit protein uL2, Large ribosomal subunit protein uL3, 60S ribosomal protein L4, 60S ribosomal protein L5, Large ribosomal subunit protein eL6, Large ribosomal subunit protein uL30, 60S ribosomal protein L7a, 60S ribosomal protein L9, 60S ribosomal protein L10, 60S ribosomal protein L11, 60S ribosomal protein L13, 60S ribosomal protein L14, 60S ribosomal protein L15, 60S ribosomal protein L13a, 60S ribosomal protein L17, 60S ribosomal protein L18, 60S ribosomal protein L19, 60S ribosomal protein L18a, 60S ribosomal protein L21, 60S ribosomal protein L22, 60S ribosomal protein L23, 60S ribosomal protein L24, 60S ribosomal protein L23a, 60S ribosomal protein L26, 60S ribosomal protein L27, Large ribosomal subunit protein uL15, Large ribosomal subunit protein eL29, 60S ribosomal protein L30, 60S ribosomal protein L31, 60S ribosomal protein L32, 60S ribosomal protein L35a, 60S ribosomal protein L34, 60S ribosomal protein L35, 60S ribosomal protein L36, Large ribosomal subunit protein eL37, 60S ribosomal protein L38, 60S ribosomal protein L39, Ubiquitin-ribosomal protein eL40 fusion protein, 60S ribosomal protein L41, Large ribosomal subunit protein eL42, 60S ribosomal protein L37a, Large ribosomal subunit protein eL28, Small ribosomal subunit protein uS2, 40S ribosomal protein S3a, 40S ribosomal protein S2, 40S ribosomal protein S3, Small ribosomal subunit protein eS4, X isoform, 40S ribosomal protein S5, 40S ribosomal protein S6, 40S ribosomal protein S7, 40S ribosomal protein S8, 40S ribosomal protein S9, 40S ribosomal protein S10, 40S ribosomal protein S11, Small ribosomal subunit protein eS12, 40S ribosomal protein S13, 40S ribosomal protein S14, 40S ribosomal protein S15, 40S ribosomal protein S16, 40S ribosomal protein S17, 40S ribosomal protein S18, 40S ribosomal protein S19, 40S ribosomal protein S20, Small ribosomal subunit protein eS21, 40S ribosomal protein S15a, 40S ribosomal protein S23, 40S ribosomal protein S24, 40S ribosomal protein S25, 40S ribosomal protein S26, 40S ribosomal protein S27, 40S ribosomal protein S28, 40S ribosomal protein S29, Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein, Ubiquitin, Receptor of activated protein C kinase 1
Pairwise Interactions
Interactions annotated by FR3D:- 2,185 base-pairs
- 5,729 base-stacking
- 517 base-phosphate
- 559 base-ribose
- 250 oxygen stacking
- 404 sugar-ribose
RNA 3D Motifs
In the current release of the RNA 3D Motif Atlas, 9RU9 contains:- 111 hairpin loops from 0 motif groups
- 261 internal loops from 0 motif groups
- 69 junction loops from 0 motif groups
3D Redundancy
9RU9 has chains which belong to the following equivalence classes in the current representative set:- NR_all_90476.6 (1)
- NR_all_65061.57 (1)
- NR_all_52752.53 (1)
- NR_all_46995.66 (1)
- NR_all_83098.13 (1)
- NR_4.0_90476.6 (1)
- NR_4.0_65061.57 (1)
- NR_4.0_52752.53 (1)
- NR_4.0_46995.66 (1)
- NR_4.0_83098.13 (1)
- NR_3.5_90476.6 (1)
- NR_3.5_65061.57 (1)
- NR_3.5_52752.53 (1)
- NR_3.5_46995.66 (1)
- NR_3.5_83098.13 (1)
- NR_3.0_90476.6 (1)
- NR_3.0_65061.57 (1)
- NR_3.0_52752.53 (1)
- NR_3.0_46995.66 (1)
- NR_3.0_83098.13 (1)
- NR_20.0_90476.6 (1)
- NR_20.0_65061.57 (1)
- NR_20.0_52752.53 (1)
- NR_20.0_46995.66 (1)
- NR_20.0_83098.13 (1)
Similar structures
8XSX 6ZP4 8PPL 9YPZ 9YQ1 9YQ0 9YPY 9SPF 8K2C 9SPI 7QVP 8PJ5 9YPW 9I14 9KRP 7A09 8PJ6 9YPO 6Y57 8XSZ 9KN6 9YPG 9YPS 9YPT 8PJ4 9YPV 9RUA 8PJ1 9M0P 4UG0 9YPZ 8PJ2 9YQ1 9YQ0 9RU8 7TQL 9YPY 8PJ3 9YPV 5T2C 9YPS 9YPW 9YPO 9YPT 8XSZ 9YPG 8XSY 6FEC 4V6X 4KZZ 6QZPStructures from NR_all_83098.13