9ZGT | Motifs

Download loops

10 Hairpin loops
7 Internal loops
5 Junction loops

Valid loops

3D	Loop id	Location	Annotation; motif group	Mapped info
	HL_9ZGT_002	1/A/69:76	No text annotation	geometric HL_8B0X_041 HL_13999.5
	HL_9ZGT_003	1/A/97:108	No text annotation
	HL_9ZGT_007	1/A/260:272	No text annotation
	HL_9ZGT_008	1/A/288:297	No text annotation	geometric HL_2A64_005 HL_48408.1

Problematic loops

#	loop id	Problem	Sequence
	HL_9ZGT_001	poor quality numbers	No text annotation
	HL_9ZGT_004	poor quality numbers	No text annotation
	HL_9ZGT_005	poor quality numbers	No text annotation
	HL_9ZGT_006	poor quality numbers	GNRA
	HL_9ZGT_009	poor quality numbers	No text annotation
	HL_9ZGT_010	poor quality numbers	No text annotation

Valid loops

3D	Loop id	Location	Annotation; motif group	Mapped info
	IL_9ZGT_001	1/A/66:68, 1/A/77:78	Single bulged U	geometric IL_2A64_003 IL_97561.7
	IL_9ZGT_002	1/A/114:115, 1/A/136:138	Single bulged A	homologous IL_1NBS_005 IL_14190.4
	IL_9ZGT_004	1/A/284:288, 1/A/297:301	Triple sheared	geometric IL_8CRE_476 IL_15190.4
	IL_9ZGT_005	1/A/313:315, 1/A/322:324	No text annotation	geometric IL_4RC0_003 IL_01003.6
	IL_9ZGT_006	1/A/347:351, 1/A/378:382	Triple sheared	geometric IL_8P9A_463 NA

Problematic loops

#	loop id	Problem	Sequence
	IL_9ZGT_003	poor quality numbers	No text annotation
	IL_9ZGT_007	poor quality numbers	No text annotation

Valid loops

3D	Loop id	Location	Annotation; motif group	Mapped info
	J3_9ZGT_001	1/A/13:15, 1/A/344:345, 1/A/384:402	No text annotation
	J3_9ZGT_002	1/A/62:63, 1/A/81:87, 1/A/249:250	No text annotation
	J4_9ZGT_001	1/A/91:92, 1/A/113:114, 1/A/138:139, 1/A/244:245	RNase P junction	homologous J4_1NBS_002 J4_86610.2
	J6_9ZGT_001	1/A/21:23, 1/A/44:58, 1/A/254:258, 1/A/274:278, 1/A/307:309, 1/A/328:338	No text annotation

Problematic loops

#	loop id	Problem	Sequence
	J3_9ZGT_003	poor quality numbers	No text annotation

Coloring options: Nucleotide numbers

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