Motif IL_97868.1 Version IL_97868.1 of this group appears in releases 2.0 to 2.0
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | break | 5 | 6 | 1-6 | 2-3 | 4-5 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | ➜ | 3JCS | 0.3579 | 6 | 2 | LSU rRNA | A | 766 | U | 767 | A | 769 | A | 772 | * | U | 1010 | U | 1014 | cWW | cWS | cWW | |
| 2 | ➜ | 5AJ0 | 0.2292 | 5 | A2 | LSU rRNA | G | 4052 | U | 4053 | A | 4055 | C | 4058 | * | G | 4123 | C | 4126 | cWW | cWS | cWW | |
| 3 | ➜ | 4V91 | 0.1741 | 5 | 1 | LSU rRNA | A | 2520 | U | 2521 | A | 2523 | C | 2526 | * | G | 2584 | U | 2587 | cWW | ncWS | cWW | |
| 4 | ➜ | 4V88 | 0.0000 | 5 | A5 | LSU rRNA | A | 2520 | U | 2521 | A | 2523 | C | 2526 | * | G | 2584 | U | 2587 | cWW | cWS | cWW | |
| 5 | ➜ | 4V8P | 0.5663 | 5 | F1 | LSU rRNA | G | 2515 | U | 2516 | A | 2518 | A | 2521 | * | U | 2573 | C | 2576 | cWW | ncWH | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| AUGAAGC*GGGU | 2 |
| GUGAAGA*UUGC | 1 |
| GUGAGGC*GCUC | 1 |
| AUGAAGA*UUGUU | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UGAAG*GG | 2 |
| UGAAG*UG | 1 |
| UGAGG*CU | 1 |
| UGAAG*UGU | 1 |
Release history
| Release | 2.0 |
|---|---|
| Date | 2017-04-24 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.
Coloring options: