#IFECompound(s)RNA source organismTitleMethodResolutionDate
13C3Z|1|A+ 3C3Z|1|B (rep)HIV-1 subtype F genomic RNACrystal structure of HIV-1 subtype F DIS extended duplex RNA bound to ribostamycinX-RAY DIFFRACTION1.52008-05-06
21NLC|1|B+ 1NLC|1|AHIV-1 DIS(MAL) genomic RNAHIV-1 DIS(Mal) duplex Zn-soakedX-RAY DIFFRACTION1.852003-05-13
32QEK|1|A+ 2QEK|1|BHIV-1 subtype F DIS genomic RNAHIV-1 subtype F DIS RNA extended duplex formX-RAY DIFFRACTION1.82008-05-06
42OIY|1|A+ 2OIY|1|B5'-R(*CP*UP*UP*GP*CP*UP*GP*AP*AP*GP*CP*GP*CP*GP*CP*AP*CP*GP*GP*CP*AP*AP*G)-3'Crystal structure of the duplex form of the HIV-1(LAI) RNA dimerization initiation siteX-RAY DIFFRACTION1.62007-12-25
53C44|1|A+ 3C44|1|BHIV-1 subtype F genomic RNACrystal structure of HIV-1 subtype F DIS extended duplex RNA bound to paromomycinX-RAY DIFFRACTION22008-05-06
63DVV|1|A+ 3DVV|1|BHIV-1 genomic RNACrystal structure of HIV-1 subtype F DIS extended duplex RNA bound to ribostamycin (U267OMe)X-RAY DIFFRACTION22008-08-12
73C7R|1|A+ 3C7R|1|BHIV-1 subtype F genomic RNACrystal Structure of HIV-1 subtype F DIS extended duplex RNA bound to neomycinX-RAY DIFFRACTION1.72008-05-06
83C5D|1|A+ 3C5D|1|B'HIV-1 subtype F genomic RNACrystal structure of HIV-1 subtype F DIS extended duplex RNA bound to lividomycinX-RAY DIFFRACTION1.82008-05-06

Release history

Release2.1242.1252.1262.1272.1282.1292.1302.131
Date2017-04-262017-04-292017-05-092017-05-152017-05-202017-05-272017-06-072017-06-11

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_2.0_60167.2NR_2.0_60167.12.124(5) 3DVV|1|A+3DVV|1|B, 3C44|1|A+3C44|1|B, 2QEK|1|A+2QEK|1|B, 2OIY|1|A+2OIY|1|B, 1NLC|1|B+1NLC|1|A(3) 3C7R|1|A+3C7R|1|B, 3C5D|1|A+3C5D|1|B, 3C3Z|1|A+3C3Z|1|B(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_2.0_60167.2NR_2.0_60167.32.132(5) 1NLC|1|B+1NLC|1|A, 3C44|1|A+3C44|1|B, 2OIY|1|A+2OIY|1|B, 3DVV|1|A+3DVV|1|B, 2QEK|1|A+2QEK|1|B(3) 3C7R|1|A+3C7R|1|B, 3C5D|1|A+3C5D|1|B, 3C3Z|1|A+3C3Z|1|B(0)

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
13DVV|1|A+3DVV|1|BCrystal structure of HIV-1 subtype F DIS extended duplex RNA bound to ribostamycin (U267OMe)X-RAY DIFFRACTION222
23C3Z|1|A+3C3Z|1|BCrystal structure of HIV-1 subtype F DIS extended duplex RNA bound to ribostamycinX-RAY DIFFRACTION1.522
33C7R|1|A+3C7R|1|BCrystal Structure of HIV-1 subtype F DIS extended duplex RNA bound to neomycinX-RAY DIFFRACTION1.722
43C5D|1|A+3C5D|1|BCrystal structure of HIV-1 subtype F DIS extended duplex RNA bound to lividomycinX-RAY DIFFRACTION1.822
53C44|1|A+3C44|1|BCrystal structure of HIV-1 subtype F DIS extended duplex RNA bound to paromomycinX-RAY DIFFRACTION223
62OIY|1|A+2OIY|1|BCrystal structure of the duplex form of the HIV-1(LAI) RNA dimerization initiation siteX-RAY DIFFRACTION1.623
71NLC|1|B+1NLC|1|AHIV-1 DIS(Mal) duplex Zn-soakedX-RAY DIFFRACTION1.8526
82QEK|1|A+2QEK|1|BHIV-1 subtype F DIS RNA extended duplex formX-RAY DIFFRACTION1.823