1M5O Internal, Hairpin and 3-way Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_1M5O_001 | 1/B/35:46 | No text annotation Not in a motif group | geometric HL_1M5K_002 HL_31581.5 | |
| HL_1M5O_003 | 1/E/35:46 | No text annotation Not in a motif group | geometric HL_4WF9_003 HL_75407.1 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_1M5O_002 | GNRA | ||
| HL_1M5O_004 | No text annotation |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_1M5O_001 | 1/A/11:16, 1/B/6:11 | No text annotation Not in a motif group | ||
| IL_1M5O_002 | 1/B/19:27, 1/B/54:64 | No text annotation Not in a motif group | geometric IL_2P7E_001 IL_68506.1 | |
| IL_1M5O_004 | 1/D/11:16, 1/E/6:11 | No text annotation Not in a motif group | ||
| IL_1M5O_005 | 1/E/19:27, 1/E/54:64 | No text annotation Not in a motif group | geometric IL_1M5K_003 IL_68506.1 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_1M5O_003 | Isolated cWH basepair |
Valid loops
No loops found
Problematic loops
No problematic loops
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