4NYD Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_4NYD_002 | 1/A/66:73 | T-loop related | homologous HL_7TZS_002 HL_77436.5 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_4NYD_001 | No text annotation |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_4NYD_004 | 1/A/18:21, 1/A/38:48 | No text annotation | ||
| IL_4NYD_002 | 1/A/20:21, 1/A/38:45 | Stack outside cWW | homologous IL_7TZS_002 IL_38394.1 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_4NYD_001 | Isolated non-canonical cWW pair | ||
| IL_4NYD_003 | cWH basepair and non-canonical AC |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J3_4NYD_001 | 1/A/14:15, 1/A/51:57, 1/A/82:85 | No text annotation |
Problematic loops
No problematic loops
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