#SLoop idPDBDisc#Non-coreChain(s) 1 2 3 4 5 6 7 8 91-92-83-7
1 HL_3O30_0233O300.000011U1055U1056U1057U1058U1060A1061A1062U1063G1064ntSH
2 HL_2XZM_0212XZM0.79212AG975A976U977C978G980A981A983C984C985cWW
3 HL_3O30_0223O300.856321G997A998U999C1000G1002A1003A1005C1006C1007cWW
4 HL_3O30_0203O300.726911A900G901G902U903A905A906A907U908U909cWW
5 HL_3O30_0313O300.661001G1395U1396U1397U1398C1399A1400A1401G1402C1403cWWncWWntSH
6 HL_1FJG_0171FJG0.76932AG786A787U788U789G791A792A794C795C796cWW
7 HL_2XZM_0192XZM0.87391AA878G879G880U881A883A884A885U886U887cWWtSH
8 HL_2AW7_0152AW70.88271AC689G690G691U692A694A695A696U697G698cWWtSHtSH

3D structures

Complete motif including flanking bases
SequenceCounts
GAUCAGAUACC2
AGGUGAAAUU2
UUUUUUAAUG1
GUUUCAAGC1
GAUUAGAUACC1
CGGUGAAAUG1
Non-Watson-Crick part of the motif
SequenceCounts
GGUGAAAU3
AUCAGAUAC2
UUUUUAAU1
UUUCAAG1
AUUAGAUAC1

Release history

Release0.10.2
Date2011-12-082011-12-08
StatusNew id, no parentsExact match

Parent motifs

This motif has no parent motifs.

Children motifs

Child motifCommon motif instancesOnly in HL_06440.1Only in the child motif
HL_46175.1
Compare
HL_2AW7_015, HL_1FJG_017, HL_2XZM_019, HL_2XZM_021HL_3O30_020, HL_3O30_022, HL_3O30_031, HL_3O30_023HL_3R9X_001, HL_1FJG_015, HL_4A1C_004, HL_3U5F_023, HL_3U5F_021, HL_2AW7_017
Annotations
  • (8)
  • Basepair signature
    Heat map statistics
    Min 0.19 | Avg 0.53 | Max 0.88
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