Motif HL_07480.1 Version HL_07480.1 of this group appears in releases 3.89 to 3.94
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 1-7 | 2-6 | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_1B23_001 | 1B23 | 0.1937 | 4 | R | tRNA | A | 12 | A | 13 | A | 14 | G | 15 | C | 16 | A | 22 | U | 23 | cWW | ntSH |
| 2 | HL_1U0B_001 | 1U0B | 0.0000 | 4 | A | tRNA | A | 12 | A | 13 | A | 14 | G | 15 | C | 16 | A | 22 | U | 23 | cWW | tSH |
| 3 | HL_2DU3_001 | 2DU3 | 0.6584 | 4 | D | tRNA | A | 912 | G | 913 | A | 914 | G | 915 | G | 916 | U | 921 | U | 922 | cWW | ntSH |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| AAAGCGGAU | 1 |
| AAAGCGGUUAU | 1 |
| AGAGGGGCUUU | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AAGCGG(H2U)(H2U)A | 1 |
| AAGCGGUUA | 1 |
| GAGGGGCUU | 1 |
- Annotations
-
- (3)
- Basepair signature
- cWW-tSH-F-F-F
- Heat map statistics
- Min 0.19 | Avg 0.38 | Max 0.84
Coloring options: