#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2 3 4 5 6 7 81-82-77-8
1 HL_4WT8_2154WT80.49193 D4 tRNAC13A14G15C16C17U18A22G23cWWncWS
2 HL_4V9Q_2134V9Q0.27893 DV tRNAC13A14G15C16C17U17|||AA21G22cWWncSH
3 HL_6CFJ_1066CFJ0.25103 1x tRNAC13A14G15C16C17U17|||AA21G22cWWcWS
4 HL_1H4S_0011H4S0.24443 T tRNAC13A14G15C16C17C17|||AA21G22cWW
5 HL_1J1U_0041J1U0.00003 BtRNA(Tyr)C513||||4_556A514||||4_556G515||||4_556C516||||4_556C517||||4_556U518||||4_556A522||||4_556G523||||4_556cWWncWS
6 HL_1J1U_0011J1U0.00003 BtRNA(Tyr)C513A514G515C516C517U518A522G523cWWncWS
7 HL_2ZUE_0012ZUE0.27984 BtRNA-ArgU913A914G915C916C917A917|||AA921G922cWWcWS

3D structures

Complete motif including flanking bases
SequenceCounts
CAGCCUGGUAG5
CAGCCCGGUAG1
UAGCCAGGACAG1
Non-Watson-Crick part of the motif
SequenceCounts
AGCCUGGUA5
AGCCCGGUA1
AGCCAGGACA1

Release history

Release3.33.43.53.63.73.83.93.103.113.123.133.143.153.163.173.183.193.203.213.223.233.243.253.263.273.283.293.303.313.323.333.343.353.363.373.383.393.403.413.423.433.443.453.463.473.483.493.503.513.523.533.543.553.563.573.583.593.603.61
Date2018-03-082018-04-062018-05-042018-06-012018-06-292018-07-272018-08-242018-09-212018-10-192018-11-162018-12-142019-01-112019-02-082019-03-082019-04-052019-05-032019-05-312019-06-282019-07-262019-08-232019-09-192019-10-162019-11-132019-12-112020-01-082020-02-052020-03-042020-04-012020-04-292020-05-272020-06-242020-07-222020-08-192020-09-162020-10-142020-11-112020-12-092021-01-062021-02-032021-03-032021-03-312021-04-282021-05-262021-06-232021-07-212021-08-182021-09-152021-10-132021-11-102021-12-082022-01-052022-02-022022-03-022022-03-302022-04-272022-05-252022-06-222022-07-202022-08-17
StatusUpdated, 1 parentExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
Basepair signature
cWW-cWS-R-R-R-R
Heat map statistics
Min 0.24 | Avg 0.29 | Max 0.57
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