Motif HL_13105.1 Version HL_13105.1 of this group appears in releases 1.0 to 1.4
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 1-9 | 2-8 | 3-7 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_3U5F_034 | 3U5F | 0 | 3 | 6 | 18S rRNA | A | 1550 | U | 1551 | U | 1552 | G | 1553 | U | 1554 | A | 1555 | A | 1556 | U | 1560 | U | 1561 | cWW | ncWH | tWH |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| AUUGUAAUUAUU | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UUGUAAUUAU | 1 |
Release history
| Release | 1.0 | 1.1 | 1.2 | 1.3 | 1.4 |
|---|---|---|---|---|---|
| Date | 2013-03-04 | 2013-04-06 | 2013-05-04 | 2013-06-01 | 2013-07-03 |
| Status | New id, 1 parent | Exact match | Exact match | Exact match | Exact match |
Parent motifs
| Parent motif | Common motif instances | Only in HL_13105.1 | Only in the parent motif |
|---|---|---|---|
| HL_20739.1 Compare | HL_3U5F_034 | HL_1P6V_002, HL_2XZM_032 |
Children motifs
| Child motif | Common motif instances | Only in HL_13105.1 | Only in the child motif |
|---|---|---|---|
| HL_91872.1 Compare | HL_3U5F_034 | HL_4BPP_033 |
- Annotations
-
- (1)
- Basepair signature
- cWW-cWH-tWH-R-R-R
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: