Motif HL_15574.1 Version HL_15574.1 of this group appears in releases 3.89 to 3.97
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 1-7 | 2-4 | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_6VMY_002 | 6VMY | 0.0000 | 1 | A | Cobalamin riboswitch | G | 253 | U | 254 | A | 255 | A | 257 | A | 258 | G | 259 | C | 260 | cWW | ncWH |
| 2 | HL_4R4V_002 | 4R4V | 0.7654 | 0 | A | VS ribozyme RNA | G | 670 | A | 671 | A | 672 | A | 673 | C | 674 | A | 675 | C | 676 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GUAAAAGC | 1 |
| GAAACAC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UAAAAG | 1 |
| AAACA | 1 |
Release history
| Release | 3.89 | 3.90 | 3.91 | 3.92 | 3.93 | 3.94 | 3.95 | 3.96 | 3.97 |
|---|---|---|---|---|---|---|---|---|---|
| Date | 2024-10-09 | 2024-11-06 | 2024-12-04 | 2025-01-01 | 2025-01-29 | 2025-02-26 | 2025-03-26 | 2025-04-23 | 2025-05-21 |
| Status | New id, 2 parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-F-F-F-F-F
- Heat map statistics
- Min 0.77 | Avg 0.38 | Max 0.77
Coloring options: