#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2 3 4 5 6 7 8 9 10 11 12 131-132-124-104-115-8
1 HL_6GSL_2216GSL0.49240 3L tRNAC30G31G32C33U34A35C36G37A38A39C40C41G42cWWncWWncWw
2 HL_4V88_1994V880.00000 A6 SSU rRNAA520A521U522G523U524A525A526A527U528A529C530C531U532cWWncWWatSH
3 HL_4WFL_0014WFL0.23380 A LSRP RNAG19A20G21G22U23A24G25C26G27G28U29G30C31cWWcWWtSHntSHa

3D structures

Complete motif including flanking bases
SequenceCounts
CGGCUACGAACCG1
AAUGUAAAUACCU1
GAGGUAGCGGUGC1
Non-Watson-Crick part of the motif
SequenceCounts
GGCUACGAACC1
AUGUAAAUACC1
AGGUAGCGGUG1

Release history

Release3.83.93.103.113.123.133.143.153.163.173.183.193.203.213.223.233.243.253.263.273.283.293.303.313.323.333.343.353.363.373.383.393.403.413.423.433.443.453.463.473.483.493.503.513.523.533.543.553.563.573.583.593.603.613.623.633.643.653.663.673.683.693.703.713.723.733.743.753.76
Date2018-07-272018-08-242018-09-212018-10-192018-11-162018-12-142019-01-112019-02-082019-03-082019-04-052019-05-032019-05-312019-06-282019-07-262019-08-232019-09-192019-10-162019-11-132019-12-112020-01-082020-02-052020-03-042020-04-012020-04-292020-05-272020-06-242020-07-222020-08-192020-09-162020-10-142020-11-112020-12-092021-01-062021-02-032021-03-032021-03-312021-04-282021-05-262021-06-232021-07-212021-08-182021-09-152021-10-132021-11-102021-12-082022-01-052022-02-022022-03-022022-03-302022-04-272022-05-252022-06-222022-07-202022-08-172022-10-122022-11-092022-12-072023-01-042023-02-012023-03-012023-03-292023-04-262023-05-242023-06-212023-07-192023-08-162023-09-132023-10-112023-11-08
StatusUpdated, 1 parentExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
Basepair signature
cWW-cWW-R-tSH-R-tSH-R-R
Heat map statistics
Min 0.23 | Avg 0.28 | Max 0.52
Help

Coloring options:

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