#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2 3 4 51-52-32-4
1 HL_6OL3_0016OL30.47832 C VA RNAG64A66C68C69C70cWWtSW
2 HL_8DK7_0018DK70.13082 CRNA (34-MER)G13A15C17A18C19cWWtSW
3 HL_3IVK_0033IVK0.15832 Mclass I ligase productG59A61C63A64C65cWWtSW
4 HL_8VM8_0038VM80.15142 RRNA (93-MER)G63A65C67A68C69cWWncSHtSW
5 HL_4KZD_0014KZD0.15072 RRNA (84-MER)G37A39C41A42C43cWWtSW
6 HL_6DB9_0016DB90.14662 RRNA (60-MER)G23A25C27A28C29cWWtSW
7 HL_8D29_0028D290.11712 FRNA (34-MER)G13A15C17A18C19cWWtSW
8 HL_8D29_0038D290.11862 JRNA (34-MER)G13A15C17A18C19cWWtSW
9 HL_8VM9_0068VM90.12002 RRNA (85-MER)G57A59C61A62C63cWWncSHntSW
10 HL_8T29_0018T290.10532 RRNA (90-MER)G35A37C39A40C41cWWncSHtSW
11 HL_8VMB_0018VMB0.10182 RRNA (83-MER)G18A20C22A23C24cWWncSHntSW
12 HL_8DP3_0018DP30.00002 RRNA (90-MER)G20A22C24A25C26cWWncSHtSW
13 HL_8VMA_0038VMA0.09162 CRNA (88-MER)G60A62C64A65C66cWWncSHtSW
14 HL_7MLX_0027MLX0.07722 RRNA (65-MER)G40A42C44A45C46cWWtSW
15 HL_8D29_0018D290.08192 CRNA (34-MER)G13A15C17A18C19cWWtSW
16 HL_6X5M_0026X5M0.10632 rggPAN RNA (39-MER)G14A16C18A19C20cWWtSW
17 HL_7SZU_0017SZU0.11332 RRNA aptamerG35A37C39A40C41cWWtSW
18 HL_8UIW_0018UIW0.08962 NyjdF RNA (R. gauvreauii)G29A31C33A34C35cWWncSHtSW
19 HL_7A0S_0617A0S0.49092 X LSU rRNAC2530U2531U2534C2535G2536cWWntSH
20 HL_4WF9_0584WF90.48022 X LSU rRNAC2578U2579U2582C2583G2584cWWntSH
21 HL_5TBW_0635TBW0.54582 1 LSU rRNAU2920U2921U2924C2925A2926cWWntSH
22 HL_8C3A_0648C3A0.56412 1 LSU rRNAU2892U2893U2896C2897A2898cWWntSH

3D structures

Complete motif including flanking bases
SequenceCounts
GAAACAC17
CUGUUCG2
UUGUUCA2
GAACCCC1
Non-Watson-Crick part of the motif
SequenceCounts
AAACA17
UGUUC4
AACCC1

Release history

Release3.87
Date2024-08-14
StatusNew id, 2 parents

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
Basepair signature
cWW-tSW-F
Heat map statistics
Min 0.03 | Avg 0.27 | Max 0.95
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