Motif HL_26631.1 Version HL_26631.1 of this group appears in releases 3.89 to 3.97
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 1-5 | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_3SNP_002 | 3SNP | 0.0000 | 0 | D | ferritin H IRE RNA | C | 14 | A | 15 | G | 16 | U | 17 | G | 18 | cWW |
| 2 | HL_3SN2_001 | 3SN2 | 0.0895 | 0 | B | transferrin receptor iron regulatory element B RNA | C | 14 | A | 15 | G | 16 | U | 17 | G | 18 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CAGUG | 2 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AGU | 2 |
Release history
| Release | 3.89 | 3.90 | 3.91 | 3.92 | 3.93 | 3.94 | 3.95 | 3.96 | 3.97 |
|---|---|---|---|---|---|---|---|---|---|
| Date | 2024-10-09 | 2024-11-06 | 2024-12-04 | 2025-01-01 | 2025-01-29 | 2025-02-26 | 2025-03-26 | 2025-04-23 | 2025-05-21 |
| Status | New id, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-F-F-F
- Heat map statistics
- Min 0.09 | Avg 0.04 | Max 0.09
Coloring options: