#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2 31-3
1 HL_5F9R_0025F9R0.26111 ARNA (116-MER)C73A75G76cWW
2 HL_7A0S_0397A0S0.30971 X LSU rRNAC1581A1583G1584cWW
3 HL_5J7L_1725J7L0.30491 DA LSU rRNAC1565G1567G1568cWW
4 HL_7RQB_0397RQB0.25691 1A LSU rRNAC1565A1567G1568cWW
5 HL_7ZO1_0027ZO10.24051 ACD34 sgRNAC55A57G58cWW
6 HL_7QQP_0027QQP0.21061 AAAVS1 sgRNAC55A57G58cWW
7 HL_7QR8_0027QR80.18471 APTPRC sgRNAC55A57G58cWW
8 HL_4ZT0_0054ZT00.20791 Dsingle-guide RNAC55A57G58cWW
9 HL_5B2T_0025B2T0.21161 AGuide RNAC55A57G58cWW
10 HL_7QR0_0027QR00.20761 ATRAC sgRNAC55A57G58cWW
11 HL_7QQX_0027QQX0.21231 AFANCF sgRNAC55A57G58cWW
12 HL_5FQ5_0025FQ50.21211 ASGRNAC55A57G58cWW
13 HL_5VW1_0025VW10.20501 CsgRNAC55A57G58cWW
14 HL_5TBW_0405TBW0.19732 1 LSU rRNAC1792U1795G1796cWW
15 HL_2QUS_0022QUS0.21103 AHammerhead ribozymeC32U36G37cWW
16 HL_2QUW_0022QUW0.21733 BHammerhead ribozyme, cleaved fragmentC32U36G37cWW
17 HL_5DH6_0015DH60.18453 Ahammerhead ribozymeC16U20G21cWW
18 HL_2F8K_0012F8K0.23071 BRNA (16-mer)U6G8A9cWW
19 HL_2OEU_0012OEU0.23293 AHammerhead RibozymeC15U19G20cWW
20 HL_4LFB_0184LFB0.26182 A SSU rRNAG838C840C848ncWW
21 HL_6JOO_0026JOO0.20251 BGuide RNAC58C60G61cWW
22 HL_5J7L_2045J7L0.14472 DB 5S rRNAG86C88C90cWW
23 HL_6MSF_0026MSF0.16892 SRNA (10-mer)G6||||P_1C8||||P_1C10||||P_1cWW
24 HL_6MSF_0016MSF0.14692 RRNA (14-mer)G6||||P_1C8||||P_1C10||||P_1cWW
25 HL_8DP3_0028DP30.00002 RRNA (90-MER)C39U41G43cWW
26 HL_8C3A_1988C3A0.16001 CM SSU rRNAC274U276G277cWW
27 HL_5AH5_0075AH50.16552 D tRNAC46|||AC46|||CG46|||EcWW

3D structures

Complete motif including flanking bases
SequenceCounts
CUAG10
CUGAUG4
CAAG2
GUCUC2
GUCAC2
CAGG1
CCGUG1
UUGA1
CUCG1
CAUUG1
CUUG1
CUCUG1
Non-Watson-Crick part of the motif
SequenceCounts
UA10
UGAU4
UCU3
AA2
UCA2
AG1
CGU1
UG1
UC1
AUU1
UU1

Release history

Release3.803.813.823.83
Date2024-01-312024-02-282024-03-272024-04-24
StatusUpdated, 2 parentsExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
Basepair signature
cWW-F
Heat map statistics
Min 0.02 | Avg 0.19 | Max 0.38
Help

Coloring options:

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