Motif HL_42545.1 Version HL_42545.1 of this group appears in releases 3.89 to 3.95
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 1-7 | 2-6 | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_1VTQ_004 | 1VTQ | 0.0000 | 3 | A | tRNA | PSU | 13 | A | 14 | A | 15 | H2U | 19 | C | 20 | A | 21 | G | 22 | cWW | cWS |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| (PSU)AA(H2U)GG(H2U)CAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AA(H2U)GG(H2U)CA | 1 |
Release history
| Release | 3.89 | 3.90 | 3.91 | 3.92 | 3.93 | 3.94 | 3.95 |
|---|---|---|---|---|---|---|---|
| Date | 2024-10-09 | 2024-11-06 | 2024-12-04 | 2025-01-01 | 2025-01-29 | 2025-02-26 | 2025-03-26 |
| Status | New id, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (1)
- Basepair signature
- cWW-F-F-F-F-cSW-cSH-F
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: