Motif HL_43517.1 Version HL_43517.1 of this group appears in releases 3.89 to 3.98
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 1-5 | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_8XZL_001 | 8XZL | 0.0000 | 0 | Mini UNCG | A | THF-II riboswitch (folE RNA) | C | 28 | U | 29 | U | 30 | C | 31 | G | 32 | cWW |
| 2 | HL_2OZB_001 | 2OZB | 0.6980 | 2 | C | RNA comprising the 5' Stem-Loop RNA of U4snRNA | G | 35 | U | 36 | U | 37 | A | 39 | C | 41 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CUUCG | 1 |
| GUUUAUC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UUC | 1 |
| UUUAU | 1 |
Release history
| Release | 3.89 | 3.90 | 3.91 | 3.92 | 3.93 | 3.94 | 3.95 | 3.96 | 3.97 | 3.98 |
|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2024-10-09 | 2024-11-06 | 2024-12-04 | 2025-01-01 | 2025-01-29 | 2025-02-26 | 2025-03-26 | 2025-04-23 | 2025-05-21 | 2025-06-18 |
| Status | New id, 2 parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (1)
- Mini UNCG (1)
- Basepair signature
- cWW-F-F-F
- Heat map statistics
- Min 0.70 | Avg 0.35 | Max 0.70
Coloring options: