#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 211-212-52-153-63-134-215-86-97-128-159-1310-1711-18
1 HL_6E8S_0016E8S0.00003AiMango-III aptamerA8G9G10A12G13G14A15G18G19U20A21U22G23U24G25G26U27A28U29A30U31cWWcWHcHWcWHcHWncWScWHcWHtWWcWHcWHtWWatHH
2 HL_6E8T_0016E8T0.15693ARNA (35-MER)A7G8G9A11G12G13U14G17G18U19A20U21G22U23G24G25U26A27U28A29U30cWWcWHcHWcWHcHWcWHcWHtWWcWHcWHtWWatHH

3D structures

Complete motif including flanking bases
SequenceCounts
AGGAAGGAUUGGUAUGUGGUAUAU1
AGGAAGGUUUGGUAUGUGGUAUAU1
Non-Watson-Crick part of the motif
SequenceCounts
GGAAGGAUUGGUAUGUGGUAUA1
GGAAGGUUUGGUAUGUGGUAUA1

Release history

Release3.183.193.203.213.223.233.243.253.263.273.283.293.303.313.323.333.343.353.363.373.383.393.403.413.423.433.443.453.463.473.483.493.503.513.523.533.543.553.563.573.583.593.603.613.623.633.643.653.663.673.683.693.703.713.723.733.743.753.763.773.783.793.803.81
Date2019-05-032019-05-312019-06-282019-07-262019-08-232019-09-192019-10-162019-11-132019-12-112020-01-082020-02-052020-03-042020-04-012020-04-292020-05-272020-06-242020-07-222020-08-192020-09-162020-10-142020-11-112020-12-092021-01-062021-02-032021-03-032021-03-312021-04-282021-05-262021-06-232021-07-212021-08-182021-09-152021-10-132021-11-102021-12-082022-01-052022-02-022022-03-022022-03-302022-04-272022-05-252022-06-222022-07-202022-08-172022-10-122022-11-092022-12-072023-01-042023-02-012023-03-012023-03-292023-04-262023-05-242023-06-212023-07-192023-08-162023-09-132023-10-112023-11-082023-12-062024-01-032024-01-032024-01-312024-02-28
StatusNew id, no parentsExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (2)
  • Basepair signature
    cWW-tSW-cSH-tHH-tWW-cHW-cWH-cHW-cWH-tWW-cWH-cWH-R-cWH-cWH-R
    Heat map statistics
    Min 0.16 | Avg 0.08 | Max 0.16
    Help

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