Motif HL_65994.1 Version HL_65994.1 of this group appears in releases 0.1 to 0.2
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 1-7 | 2-6 | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_1S72_047 | 1S72 | 0.2726 | 4 | 0 | LSU rRNA | U | 1833 | C | 1834 | U | 1835 | A | 1839 | A | 1840 | C | 1841 | A | 1843 | cWW | tWH |
| 2 | HL_2QBG_047 | 2QBG | 0.2697 | 4 | B | 23S rRNA | U | 1777 | U | 1778 | U | 1779 | A | 1783 | A | 1784 | A | 1785 | A | 1787 | cWW | tWH |
| 3 | HL_3O58_046 | 3O58 | 0.0000 | 4 | 1 | 25S ribosomal RNA | U | 2135 | C | 2136 | U | 2137 | U | 2141 | A | 2142 | A | 2143 | A | 2145 | cWW | tWH |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UCUAGUAACAA | 1 |
| UUUAUUAAAAA | 1 |
| UCUAAUUAAAA | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CUAGUAACA | 1 |
| UUAUUAAAA | 1 |
| CUAAUUAAA | 1 |
Release history
Parent motifs
This motif has no parent motifs.
Children motifs
| Child motif | Common motif instances | Only in HL_65994.1 | Only in the child motif |
|---|---|---|---|
| HL_85534.1 Compare | HL_2QBG_047, HL_1S72_047 | HL_3O58_046 | HL_4A1B_045, HL_3V2F_043, HL_3U5H_046 |
Coloring options: