#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2 3 4 5 6 7 81-82-73-65-6
1 HL_5UD5_0025UD50.00001tRNA anticodon loopC tRNAA31C32U33C34A36A37A38U39cWWncWWntSH
2 HL_2BH2_0022BH20.88141D23S RIBOSOMAL RNA 1932-1968G1949G1950U1951A1952G1954U1955U1956C1957cWWncSH

3D structures

Complete motif including flanking bases
SequenceCounts
ACUCUAAAU1
GGUAAGUUC1
Non-Watson-Crick part of the motif
SequenceCounts
CUCUAAA1
GUAAGUU1

Release history

Release3.123.133.143.153.163.173.183.193.203.213.223.233.243.253.263.273.283.293.303.313.323.333.343.353.363.373.383.393.403.413.423.433.443.453.463.473.483.493.503.513.523.533.543.553.563.573.583.593.603.613.623.633.643.653.663.673.683.693.703.713.723.733.743.753.76
Date2018-11-162018-12-142019-01-112019-02-082019-03-082019-04-052019-05-032019-05-312019-06-282019-07-262019-08-232019-09-192019-10-162019-11-132019-12-112020-01-082020-02-052020-03-042020-04-012020-04-292020-05-272020-06-242020-07-222020-08-192020-09-162020-10-142020-11-112020-12-092021-01-062021-02-032021-03-032021-03-312021-04-282021-05-262021-06-232021-07-212021-08-182021-09-152021-10-132021-11-102021-12-082022-01-052022-02-022022-03-022022-03-302022-04-272022-05-252022-06-222022-07-202022-08-172022-10-122022-11-092022-12-072023-01-042023-02-012023-03-012023-03-292023-04-262023-05-242023-06-212023-07-192023-08-162023-09-132023-10-112023-11-08
StatusNew id, 2 parentsExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (1)
  • tRNA anticodon loop (1)
  • Basepair signature
    cWW-bif-R-R-R-R
    Heat map statistics
    Min 0.88 | Avg 0.44 | Max 0.88
    Help

    Coloring options:

    HL_5UD5_002:HL_5UD5_002 = 0HL_5UD5_002:HL_2BH2_002 = 0.8814HL_2BH2_002:HL_5UD5_002 = 0.8814HL_2BH2_002:HL_2BH2_002 = 0HL_5UD5_002HL_2BH2_002Discrepancy0.000.200.400.600.80
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