#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2 3 4 5 6break 7 8 9 10 11 121-122-113-104-95-86-7
1 IL_5LR3_0025LR30.37810Quadruple shearedA+BRNA (10-mer)C3G4G5A6U7G8*C3G4G5A6U7G8cWWtSHtSHtHStHScWW
2 IL_3R9W_0013R9W0.21830Quadruple shearedBRNA301G1515G1516G1517A1518A1519C1520*G1515||||2_455G1516||||2_455G1517||||2_455A1518||||2_455A1519||||2_455C1520||||2_455cWWtSHntSHntHStHScWW
3 IL_3FTF_0013FTF0.00000Quadruple shearedC+DRNA (22-mer)G1515G1516G1517A1518A1519C1520*G1515G1516G1517A1518A1519C1520cWWtSHntSHtHStHScWW
4 IL_3FTE_0013FTE0.16920Quadruple shearedC+DRNA (22-mer)G1515G1516G1517A1518A1519C1520*G1515G1516G1517A1518A1519C1520cWWtSHntHStHScWW

3D structures

Complete motif including flanking bases
SequenceCounts
GGGAAC*GGGAAC3
CGGAUG*CGGAUG1
Non-Watson-Crick part of the motif
SequenceCounts
GGAA*GGAA3
GGAU*GGAU1

Release history

Release3.773.783.793.803.813.823.833.843.853.863.873.88
Date2023-12-062024-01-032024-01-032024-01-312024-02-282024-03-272024-04-242024-05-222024-06-192024-07-172024-08-142024-09-11
StatusNew id, 2 parentsExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • Quadruple sheared (4)
  • Basepair signature
    cWW-tSH-tSH-tHS-tHS-cWW
    Heat map statistics
    Min 0.17 | Avg 0.22 | Max 0.41
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