Motif IL_06421.1 Version IL_06421.1 of this group appears in releases 1.5 to 1.14
#S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | break | 4 | 5 | 6 | 7 | 1-6 | 1-7 | 2-5 | 3-4 | |||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | IL_2QBG_087 | 2QBG | 0 | 1 | B | 23S rRNA | A | 2297 | A | 2298 | U | 2299 | * | A | 2317 | G | 2318 | G | 2319 | U | 2321 | tHS | cWW | tHS | cWW |
3D structures
Complete motif including flanking bases
Sequence | Counts |
---|---|
AAU*AGGUU | 1 |
Non-Watson-Crick part of the motif
Sequence | Counts |
---|---|
A*GGU | 1 |
Release history
Release | 1.5 | 1.6 | 1.7 | 1.8 | 1.9 | 1.10 | 1.11 | 1.12 | 1.13 | 1.14 |
---|---|---|---|---|---|---|---|---|---|---|
Date | 2013-08-03 | 2013-08-31 | 2013-09-28 | 2013-11-05 | 2013-12-07 | 2014-01-04 | 2014-02-01 | 2014-03-01 | 2014-03-29 | 2014-04-27 |
Status | New id, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
Parent motif | Common motif instances | Only in IL_06421.1 | Only in the parent motif |
---|---|---|---|
IL_16207.1 Compare | IL_2QBG_087 | IL_3U5H_104, IL_4A1B_102, IL_1S72_078, IL_4IOA_082 |
Children motifs
Child motif | Common motif instances | Only in IL_06421.1 | Only in the child motif |
---|---|---|---|
IL_11015.1 Compare | IL_2QBG_087 | IL_3V7E_007, IL_4L81_001, IL_4CUV_095, IL_4KQY_003, IL_4B5R_003, IL_3GX5_003, IL_4AOB_003, IL_3U5H_012 |
- Annotations
- Basepair signature
- cWW-tHS-tHS-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: