Motif IL_09020.1 Version IL_09020.1 of this group appears in releases 0.1 to 0.4
#S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | break | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | 14 | 15 | 16 | 1-14 | 1-16 | 2-6 | 2-15 | 3-6 | 4-5 | 7-14 | 8-12 | 9-13 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | IL_2ZJR_009 | 2ZJR | 0.0000 | 2 | X | LSU rRNA | G | 492 | A | 493 | A | 494 | C | 495 | * | G | 506 | A | 507 | G | 508 | U | 509 | G | 510 | A | 511 | A | 512 | A | 513 | A | 515 | G | 516 | A | 517 | C | 519 | tSS | cWW | cSW | ntHH | tHS | cWW | cWB | tWH | tSH |
2 | IL_3F1H_013 | 3F1H | 0.1384 | 2 | A | 23S RRNA | G | 481 | A | 482 | A | 483 | C | 484 | * | G | 496 | A | 497 | G | 498 | U | 499 | G | 500 | A | 501 | A | 502 | A | 503 | A | 505 | G | 506 | A | 507 | C | 509 | tSS | cWW | cSW | ntHH | tHS | cWW | cWB | ntWH | tSH |
3D structures
Complete motif including flanking bases
Sequence | Counts |
---|---|
GAAC*GAGUGAAAGAGAAC | 1 |
GAAC*GAGUGAAAUAGAGC | 1 |
Non-Watson-Crick part of the motif
Sequence | Counts |
---|---|
AA*AGUGAAAGAGAA | 1 |
AA*AGUGAAAUAGAG | 1 |
Release history
Release | 0.1 | 0.2 | 0.3 | 0.4 |
---|---|---|---|---|
Date | 2011-12-08 | 2011-12-08 | 2011-12-08 | 2011-12-08 |
Status | New id, no parents | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
Child motif | Common motif instances | Only in IL_09020.1 | Only in the child motif |
---|---|---|---|
IL_68345.1 Compare | IL_2ZJR_009 | IL_3F1H_013 | IL_3PYO_013, IL_2QBG_016 |
Coloring options: