#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4break 5 6 7 8 9 10 11 12 13 14 15 161-141-162-62-153-64-57-148-129-13
1 IL_2ZJR_0092ZJR0.00002X LSU rRNAG492A493A494C495*G506A507G508U509G510A511A512A513A515G516A517C519tSScWWcSWntHHtHScWWcWBtWHtSH
2 IL_3F1H_0133F1H0.13842A23S RRNAG481A482A483C484*G496A497G498U499G500A501A502A503A505G506A507C509tSScWWcSWntHHtHScWWcWBntWHtSH

3D structures

Complete motif including flanking bases
SequenceCounts
GAAC*GAGUGAAAGAGAAC1
GAAC*GAGUGAAAUAGAGC1
Non-Watson-Crick part of the motif
SequenceCounts
AA*AGUGAAAGAGAA1
AA*AGUGAAAUAGAG1

Release history

Release0.10.20.30.4
Date2011-12-082011-12-082011-12-082011-12-08
StatusNew id, no parentsExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

Child motifCommon motif instancesOnly in IL_09020.1Only in the child motif
IL_68345.1
Compare
IL_2ZJR_009IL_3F1H_013IL_3PYO_013, IL_2QBG_016
Annotations
  • (2)
  • Basepair signature
    Heat map statistics
    Min 0.14 | Avg 0.07 | Max 0.14
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