Motif IL_13224.1 Version IL_13224.1 of this group appears in releases 0.5 to 0.5
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | 1 | 2 | 3 | 4 | break | 5 | 6 | 7 | 8 | 1-8 | 2-7 | 3-6 | 4-5 | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_1CSL_001 | 1CSL | 0.0450 | 1 | A+B | G | 46 | G | 47 | G | 48 | C | 49 | * | G | 70 | G | 71 | A | 73 | C | 74 | cWW | cWW | cWH | cWW |
| 2 | IL_1DUQ_001 | 1DUQ | 0.0000 | 1 | A+B | G | 104 | G | 105 | G | 106 | C | 107 | * | G | 123 | G | 124 | A | 126 | C | 127 | cWW | cWW | cWH | cWW |
| 3 | IL_1DUQ_005 | 1DUQ | 0.0124 | 1 | E+F | G | 304 | G | 305 | G | 306 | C | 307 | * | G | 323 | G | 324 | A | 326 | C | 327 | cWW | cWW | cWH | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GGGC*GGUAC | 3 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GG*GUA | 3 |
Release history
| Release | 0.5 |
|---|---|
| Date | 2011-12-08 |
| Status | New id, 1 parent |
Parent motifs
| Parent motif | Common motif instances | Only in IL_13224.1 | Only in the parent motif |
|---|---|---|---|
| IL_58849.2 Compare | IL_1DUQ_001, IL_1DUQ_005, IL_1CSL_001 | IL_1DUQ_003, IL_1FJG_045, IL_1DUQ_007 |
Children motifs
| Child motif | Common motif instances | Only in IL_13224.1 | Only in the child motif |
|---|---|---|---|
| IL_76831.1 Compare | IL_1DUQ_001, IL_1CSL_001, IL_1DUQ_005 | IL_1QBP_008, IL_1DUQ_003, IL_3NPB_007, IL_1DUQ_007, IL_3GX5_004 |
Coloring options: