Motif IL_18488.1 Version IL_18488.1 of this group appears in releases 0.5 to 0.5
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | break | 9 | 10 | 11 | 12 | 13 | 1-5 | 1-13 | 2-12 | 4-12 | 5-11 | 5-13 | 7-10 | 8-9 | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_2QBG_042 | 2QBG | 0.0000 | 1 | B | LSU rRNA | C | 1043 | C | 1044 | C | 1045 | G | 1047 | A | 1048 | C | 1049 | A | 1050 | G | 1051 | * | U | 1108 | C | 1109 | G | 1110 | A | 1111 | G | 1112 | csS | cWW | ntsS | tSH | tSs | cWW | ||
| 2 | IL_3PYO_040 | 3PYO | 0.2399 | 1 | A | LSU rRNA | C | 1043 | G | 1044 | A | 1045 | G | 1047 | A | 1048 | C | 1049 | A | 1050 | G | 1051 | * | U | 1108 | C | 1109 | G | 1110 | A | 1111 | G | 1112 | csS | cWW | ntSH | ntHS | ncWW | ncWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CCCAGACAG*UCGAG | 1 |
| CGAAGACAG*UCGAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CCAGACA*CGA | 1 |
| GAAGACA*CGA | 1 |
Release history
| Release | 0.5 |
|---|---|
| Date | 2011-12-08 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
| Child motif | Common motif instances | Only in IL_18488.1 | Only in the child motif |
|---|---|---|---|
| IL_34363.1 Compare | IL_2QBG_042 | IL_3PYO_040 | IL_3U5H_059, IL_1S72_043 |
Coloring options: