#SLoop idPDBDisc#Non-coreAnnotationChain(s) 1 2 3 4 5 6 7 8break 9 10 11 12 13 141-142-133-124-55-116-108-9
1 IL_5J7L_0385J7L0.094508x6 Sarcin-Ricin with inserted Y; G-bulgeAAG887G888A889G890U891A892C893G894*U905A906A907A908A909C910cWWtSHtHHcSHtWHtHScWW
2 IL_4LFB_0344LFB0.000008x6 Sarcin-Ricin with inserted Y; G-bulgeAG887G888A889G890U891A892C893G894*U905G906A907A908A909C910cWWtSHtHHcSHtWHtHScWW
3 IL_4V88_4404V880.094108x6 Sarcin-Ricin with inserted Y; G-bulgeA6G1111G1112A1113G1114U1115A1116U1117G1118*U1129G1130A1131A1132A1133C1134cWWtSHtHHcSHtWHtHScWW

3D structures

Complete motif including flanking bases
SequenceCounts
GGAGUACG*UAAAAC1
GGAGUACG*UGAAAC1
GGAGUAUG*UGAAAC1
Non-Watson-Crick part of the motif
SequenceCounts
GAGUAC*AAAA1
GAGUAC*GAAA1
GAGUAU*GAAA1

Release history

Release3.33.43.53.63.73.83.93.103.23.113.123.133.143.153.163.173.183.193.203.213.223.233.243.253.263.273.283.293.303.313.323.333.343.353.363.373.383.393.403.413.423.433.443.453.463.473.483.493.503.513.523.533.543.553.563.573.583.593.603.613.623.633.643.653.663.673.683.693.703.713.723.733.743.753.763.773.783.79
Date2018-03-082018-04-062018-05-042018-06-012018-06-292018-07-272018-08-242018-09-212018-09-262018-10-192018-11-162018-12-142019-01-112019-02-082019-03-082019-04-052019-05-032019-05-312019-06-282019-07-262019-08-232019-09-192019-10-162019-11-132019-12-112020-01-082020-02-052020-03-042020-04-012020-04-292020-05-272020-06-242020-07-222020-08-192020-09-162020-10-142020-11-112020-12-092021-01-062021-02-032021-03-032021-03-312021-04-282021-05-262021-06-232021-07-212021-08-182021-09-152021-10-132021-11-102021-12-082022-01-052022-02-022022-03-022022-03-302022-04-272022-05-252022-06-222022-07-202022-08-172022-10-122022-11-092022-12-072023-01-042023-02-012023-03-012023-03-292023-04-262023-05-242023-06-212023-07-192023-08-162023-09-132023-10-112023-11-082023-12-062024-01-032024-01-03
StatusExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchNew id, no parentsExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • 8x6 Sarcin-Ricin with inserted Y; G-bulge (3)
  • Basepair signature
    cWW-tSH-tHH-cSH-tWH-tHS-L-cWW
    Heat map statistics
    Min 0.09 | Avg 0.07 | Max 0.12
    Help

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