#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2break 3 41-42-3
1 IL_4A1B_0324A1B0.53971126S RRNAG800U802*A779C780cWWcWW
2 IL_2QBG_0322QBG0.37431B23S rRNAU913C915*G862A863cWWcWW
3 IL_1KXK_0011KXK0.00002Aai5g group II Self-splicing intronU8C11*G61G62cWWcWW
4 IL_3V2F_1073V2F0.39681B5S Ribosomal RNAC65G67*C17G18cWWcWW
5 IL_2OZB_0012OZB0.48591Single bulged ACRNA comprising the 5' Stem-Loop RNA of U4snRNAU24G26*C47G48cWWcWW
6 IL_3U5H_0463U5H0.51862525S rRNAU1015G1018*U1034G1035cWWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
GUU*AC1
UGC*GA1
UAUC*GG1
CG*CAG1
UAG*CG1
UCCG*UG1
Non-Watson-Crick part of the motif
SequenceCounts
U*1
G*1
AU*1
*A1
A*1
CC*1

Release history

Release1.91.101.11
Date2013-12-072014-01-042014-02-01
StatusUpdated, 2 parentsExact matchExact match

Parent motifs

Children motifs

Child motifCommon motif instancesOnly in IL_25300.2Only in the child motif
IL_25300.3
Compare
IL_2QBG_032, IL_2OZB_001, IL_1KXK_001, IL_4A1B_032, IL_3V2F_107, IL_3U5H_046IL_4IOA_024
Annotations
  • (5)
  • Single bulged A (1)
  • Basepair signature
    cWW-cWW
    Heat map statistics
    Min 0.32 | Avg 0.45 | Max 0.89
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