Motif IL_25307.1 Version IL_25307.1 of this group appears in releases 0.6 to 1.14
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | break | 6 | 7 | 8 | 9 | 4-7 | 5-6 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_1Y0Q_002 | 1Y0Q | 0 | 0 | A | Group I catalytic intron | U | 92 | A | 93 | A | 94 | G | 95 | C | 96 | * | G | 111 | A | 112 | A | 113 | A | 114 | ncWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UAAGC*GAAA | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AAG*AA | 1 |
Release history
| Release | 0.6 | 0.7 | 0.8 | 0.9 | 0.10 | 0.11 | 0.12 | 1.0 | 1.1 | 1.2 | 1.3 | 1.4 | 1.5 | 1.6 | 1.7 | 1.8 | 1.9 | 1.10 | 1.11 | 1.12 | 1.13 | 1.14 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2012-04-02 | 2013-02-17 | 2013-02-17 | 2013-02-17 | 2013-02-17 | 2013-02-17 | 2013-02-17 | 2013-03-04 | 2013-04-08 | 2013-05-04 | 2013-06-01 | 2013-07-01 | 2013-08-03 | 2013-08-31 | 2013-09-28 | 2013-11-05 | 2013-12-07 | 2014-01-04 | 2014-02-01 | 2014-03-01 | 2014-03-29 | 2014-04-27 |
| Status | New id, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
| Parent motif | Common motif instances | Only in IL_25307.1 | Only in the parent motif |
|---|---|---|---|
| IL_62873.1 Compare | IL_1Y0Q_002 | IL_3BNQ_008, IL_1U6B_004, IL_2XZM_039, IL_3BNT_005, IL_3BNT_002, IL_3BNQ_002, IL_3O58_027 |
Children motifs
| Child motif | Common motif instances | Only in IL_25307.1 | Only in the child motif |
|---|---|---|---|
| IL_38328.1 Compare | IL_1Y0Q_002 | IL_1U6B_004, IL_3CUN_001 |
- Annotations
- Basepair signature
- cWW-tHH-L-R-L-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: