Motif IL_30390.1 Version IL_30390.1 of this group appears in releases 0.6 to 0.8
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | break | 7 | 8 | 9 | 10 | 11 | 12 | 1-12 | 4-9 | 5-8 | 6-7 | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_4A1B_033 | 4A1B | 0 | 0 | 1 | 26S RRNA | C | 781 | U | 782 | U | 783 | G | 784 | A | 785 | G | 786 | * | C | 794 | G | 795 | A | 796 | A | 797 | G | 798 | G | 799 | cWW | tSH | tHS | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CUUGAG*CGAAGG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UUGA*GAAG | 1 |
Release history
Parent motifs
This motif has no parent motifs.
Children motifs
| Child motif | Common motif instances | Only in IL_30390.1 | Only in the child motif |
|---|---|---|---|
| IL_93568.1 Compare | IL_4A1B_033 | IL_1FJG_026, IL_2ZJR_017, IL_4GMA_004 |
- Annotations
- Basepair signature
- cWW-cSW-L-R-tSH-tHS-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: