Motif IL_43333.1 Version IL_43333.1 of this group appears in releases 0.5 to 0.5
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | break | 11 | 12 | 13 | 1-13 | 6-7 | 10-11 | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_2QBG_077 | 2QBG | 0.0000 | 3 | B | LSU rRNA | C | 1934 | G | 1935 | A | 1936 | A | 1937 | U | 1939 | U | 1940 | C | 1941 | C | 1942 | U | 1943 | G | 1945 | * | C | 1961 | C | 1962 | G | 1964 | cWW | cWW | |
| 2 | IL_3O58_109 | 3O58 | 0.4683 | 3 | 1 | LSU rRNA | C | 2277 | C | 2278 | A | 2279 | A | 2280 | U | 2282 | G | 2283 | C | 2284 | C | 2285 | U | 2286 | G | 2288 | * | C | 2304 | G | 2305 | G | 2307 | cWW | cSH | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CGAAAUUCCUUG*CCUG | 1 |
| CCAAAUGCCUCG*CGCG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GAAAUUCCUU*CU | 1 |
| CAAAUGCCUC*GC | 1 |
Release history
| Release | 0.5 |
|---|---|
| Date | 2011-12-08 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
| Child motif | Common motif instances | Only in IL_43333.1 | Only in the child motif |
|---|---|---|---|
| IL_89028.1 Compare | IL_2QBG_077 | IL_3O58_109 | IL_4A1B_092, IL_1S72_071 |
Coloring options: