#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4 5 6 7 8 9break 10 111-114-89-10
1 IL_1MZP_0021MZP0.47422Bfragment of 23S rRNAG6G8U9A10G11G12A13A15G16*C49C50cWWtWH
2 IL_5ML7_0065ML70.43422B23S ribosomal RNAG2151G2153C2154A2155G2156C2157A2158A2160G2161*C2223C2224cWWtWHcWW
3 IL_3U4M_0023U4M0.41222B LSU rRNAG2110G2112U2113A2114G2115G2116A2117A2119G2120*C2178C2179cWWtWHcWW
4 IL_4JRC_0044JRC0.00001BDistal Stem I region of the glyQS T box leader RNAC37G39A40A41G42C43G44A45G46*U68G69cWWtWHcWW
5 IL_4MGN_0024MGN0.16321AglyQS T box riboswitchC37G39A40A41G42C43G44A45G46*U68G69cWWntWHcWW

3D structures

Complete motif including flanking bases
SequenceCounts
GCGUAGGAUAG*CC2
CCGAAGCGAG*UG2
GUGCAGCAUAG*CC1
Non-Watson-Crick part of the motif
SequenceCounts
CGUAGGAUA*2
CGAAGCGA*2
UGCAGCAUA*1

Release history

Release3.773.783.793.803.813.823.833.843.853.863.873.88
Date2023-12-062024-01-032024-01-032024-01-312024-02-282024-03-272024-04-242024-05-222024-06-192024-07-172024-08-142024-09-11
StatusUpdated, 2 parentsExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (5)
  • Basepair signature
    cWW-L-cWW-L-tWH-L-R-L
    Heat map statistics
    Min 0.16 | Avg 0.41 | Max 0.99
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