Motif IL_54737.1 Version IL_54737.1 of this group appears in releases 3.88 to 3.88
#S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | break | 12 | 13 | 14 | 15 | 16 | 17 | 18 | 19 | 20 | 1-20 | 2-19 | 3-18 | 4-17 | 5-16 | 6-15 | 8-13 | 11-12 | ||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | IL_5J7L_397 | 5J7L | 0.0000 | 7 | DA | LSU rRNA | C | 2103 | C | 2104 | U | 2105 | U | 2106 | G | 2107 | A | 2108 | U | 2109 | G | 2110 | G | 2112 | U | 2113 | G | 2120 | * | C | 2178 | C | 2179 | U | 2180 | U | 2181 | U | 2182 | A | 2183 | A | 2184 | U | 2185 | G | 2186 | cWW | ncWW | ntHS | ncWW | ncWW | ncWW | ncWW | ncWW |
3D structures
Complete motif including flanking bases
Sequence | Counts |
---|---|
CCUUGAUGUGUAGGAUAG*CCUUUAAUG | 1 |
Non-Watson-Crick part of the motif
Sequence | Counts |
---|---|
CUUGAUGUGUAGGAUA*CUUUAAU | 1 |
Release history
Release | 3.88 |
---|---|
Date | 2024-09-11 |
Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (1)
- Basepair signature
- cWW-L-R-L-R-L-R-L-R-L-R-L-R-L-R-L-R-L-R
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: