Motif IL_63749.1 Version IL_63749.1 of this group appears in releases 0.5 to 0.5
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | break | 9 | 10 | 1-10 | 5-6 | 8-9 | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_1S72_039 | 1S72 | 0.0000 | 0 | SSU/LSU pseudoknot (H) | 0 | U | 1101 | C | 1102 | C | 1103 | C | 1104 | C | 1105 | A | 1106 | A | 1107 | G | 1108 | * | C | 1254 | A | 1255 | cWW | cSH | cWW |
| 2 | IL_3PYO_036 | 3PYO | 0.2011 | 0 | A | C | 1004 | C | 1005 | C | 1006 | C | 1007 | C | 1008 | A | 1009 | A | 1010 | G | 1011 | * | C | 1150 | G | 1151 | cWW | cSH | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UCCCCAAG*CA | 1 |
| CCCCCAAG*CG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CCCCAA* | 2 |
Release history
| Release | 0.5 |
|---|---|
| Date | 2011-12-08 |
| Status | New id, 1 parent |
Parent motifs
| Parent motif | Common motif instances | Only in IL_63749.1 | Only in the parent motif |
|---|---|---|---|
| IL_06484.1 Compare | IL_1S72_039 | IL_3PYO_036 | IL_1FJG_020, IL_2ZJR_033, IL_3F1H_036 |
Children motifs
| Child motif | Common motif instances | Only in IL_63749.1 | Only in the child motif |
|---|---|---|---|
| IL_24546.1 Compare | IL_1S72_039 | IL_3PYO_036 | IL_2QBG_037, IL_3U5H_054, IL_3U5F_030, IL_2XZM_028, IL_1FJG_020, IL_3UXR_037, IL_2ZJR_033, IL_2AW7_027, IL_4A1B_055 |
- Annotations
-
- SSU/LSU pseudoknot (H) (1)
- (1)
- Basepair signature
- Heat map statistics
- Min 0.20 | Avg 0.10 | Max 0.20
Coloring options: