Motif IL_73700.1 Version IL_73700.1 of this group appears in releases 3.88 to 3.89
#S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | break | 8 | 9 | 10 | 11 | 12 | 13 | 1-13 | 5-10 | 6-9 | 6-11 | 7-8 | 8-12 | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | IL_6N5P_004 | 6N5P | 0.0000 | 3 | A | cyclic di-AMP riboswitch | C | 36 | G | 37 | C | 38 | U | 39 | U | 42 | G | 44 | G | 45 | * | C | 94 | G | 95 | A | 96 | C | 97 | A | 98 | G | 99 | cWW | cWW | tHS | cWW | cWW | ntSW |
3D structures
Complete motif including flanking bases
Sequence | Counts |
---|---|
CGCUUUUUGG*CGACAG | 1 |
Non-Watson-Crick part of the motif
Sequence | Counts |
---|---|
GCUUUUUG*GACA | 1 |
- Annotations
-
- (1)
- Basepair signature
- cWW-L-R-L-cWW-L-cWW-tHS-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: