Motif IL_74214.1 Version IL_74214.1 of this group appears in releases 1.8 to 1.11
#S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | break | 4 | 5 | 1-5 | 3-4 | |||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | IL_1FJG_022 | 1FJG | 0.0000 | 4 | A | SSU rRNA | C | 569 | A | 574 | G | 575 | * | C | 880 | G | 881 | cWW | cWW | |
2 | IL_4IOA_094 | 4IOA | 0.8736 | 0 | Single bulged A (H) | X | LSU rRNA | C | 2580 | A | 2581 | G | 2582 | * | C | 2570 | G | 2571 | cWW | cWW |
3D structures
Complete motif including flanking bases
Sequence | Counts |
---|---|
CGUAAAG*CG | 1 |
CAG*CG | 1 |
Non-Watson-Crick part of the motif
Sequence | Counts |
---|---|
GUAAA* | 1 |
A* | 1 |
Release history
Release | 1.8 | 1.9 | 1.10 | 1.11 |
---|---|---|---|---|
Date | 2013-11-05 | 2013-12-07 | 2014-01-04 | 2014-02-01 |
Status | New id, 2 parents | Exact match | Exact match | Exact match |
Parent motifs
Parent motif | Common motif instances | Only in IL_74214.1 | Only in the parent motif |
---|---|---|---|
IL_97095.1 Compare | IL_4IOA_094 | IL_1FJG_022 | |
IL_33484.1 Compare | IL_1FJG_022 | IL_4IOA_094 | IL_1KXK_003, IL_3U5F_086 |
Children motifs
Child motif | Common motif instances | Only in IL_74214.1 | Only in the child motif |
---|---|---|---|
IL_13777.1 Compare | IL_4IOA_094 | IL_1FJG_022 | |
IL_47875.1 Compare | IL_1FJG_022 | IL_4IOA_094 | IL_2AW7_029, IL_3U5F_086 |
- Annotations
-
- (1)
- Single bulged A (H) (1)
- Basepair signature
- cWW-L-cWW
- Heat map statistics
- Min 0.87 | Avg 0.44 | Max 0.87
Coloring options: