#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2 3break 4 51-53-4
1 IL_1FJG_0221FJG0.00004A SSU rRNAC569A574G575*C880G881cWWcWW
2 IL_4IOA_0944IOA0.87360Single bulged A (H)X LSU rRNAC2580A2581G2582*C2570G2571cWWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
CGUAAAG*CG1
CAG*CG1
Non-Watson-Crick part of the motif
SequenceCounts
GUAAA*1
A*1

Release history

Release1.81.91.101.11
Date2013-11-052013-12-072014-01-042014-02-01
StatusNew id, 2 parentsExact matchExact matchExact match

Parent motifs

Parent motifCommon motif instancesOnly in IL_74214.1Only in the parent motif
IL_97095.1
Compare
IL_4IOA_094IL_1FJG_022
IL_33484.1
Compare
IL_1FJG_022IL_4IOA_094IL_1KXK_003, IL_3U5F_086

Children motifs

Child motifCommon motif instancesOnly in IL_74214.1Only in the child motif
IL_13777.1
Compare
IL_4IOA_094IL_1FJG_022
IL_47875.1
Compare
IL_1FJG_022IL_4IOA_094IL_2AW7_029, IL_3U5F_086
Annotations
  • (1)
  • Single bulged A (H) (1)
  • Basepair signature
    cWW-L-cWW
    Heat map statistics
    Min 0.87 | Avg 0.44 | Max 0.87
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